Query= MSMg01no355_h14.b1 MSMg01no355_h14.b1 CHROMAT_FILE:
MSMg01no355_h14.b1 PHD_FILE: MSMg01no355_h14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:56 2005
(561 letters)
>mm_chr6_32503711_32504668
Length = 958
Score = 1006 bits (520), Expect = 0.0
Identities = 548/558 (98%), Gaps = 3/558 (0%)
Strand = Plus / Plus
Query: 4 ggaattctcctgttacgggctgttctctcaggccctggctccctctggccactcagggtc 63
|||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcctgctatgggatgttctctcaggccctggctccctctggccactcagggtc 263
Query: 64 acacttctgcattcatttctgactctggaatcatttccaaccactccagaactgctctaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acacttctgcattcatttctgactctggaatcatttccaaccactccagaactgctctaa 323
Query: 124 cagggggcttccattatgaaagagccaagaaaaaaaaaaagagccactggttctctgaga 183
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 324 cagggggcttccattatgaaagagccaag-aaaaaaaaaagagccactggttctctgaga 382
Query: 184 tgcttttgtgaggtcaacattacccacctatcccaaccacaaagaaggtggcactttcca 243
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 383 tgcttttgtgaggtcaacattacccacccatcccaaccacaaagaaggtggcactttcca 442
Query: 244 gaccacatacatgagtgtgagagtaaacccagctgatgggatcttccaagtccacacaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gaccacatacatgagtgtgagagtaaacccagctgatgggatcttccaagtccacacaaa 502
Query: 304 acatgggactctagaccctgtactaaagatagatgcatggtccttgccctcaatgggatt 363
|||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 503 acatgggactctagaccctgtactaa--atagatgtatggtccttgccctcaatgggatt 560
Query: 364 ttcttgattgtcctggtggagaacacacactcacttctcatttcaagccatgccctgggc 423
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 ttcttgattgtcctggtggagaacacacactcactcctcatttcaagccatgccctgggc 620
Query: 424 tctaggccactagctctccagtacaatttcttatagcaggaacccatatgaggaagccaa 483
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctaggccactagctctccactacaatttcttatagcaggaacccatatgaggaagccaa 680
Query: 484 gttcctgggagatagggcctggaaacctataccttctctggatgttcaggtcattcttcc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gttcctgggagatagggcctggaaacctataccttctctggatgttcaggtcattcttcc 740
Query: 544 aacatggacagcactcag 561
||||||||||||||||||
Sbjct: 741 aacatggacagcactcag 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 958
Length adjustment: 10
Effective length of query: 551
Effective length of database: 948
Effective search space: 522348
Effective search space used: 522348
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_h14.g1 MSMg01no355_h14.g1 CHROMAT_FILE:
MSMg01no355_h14.g1 PHD_FILE: MSMg01no355_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:56 2005
(475 letters)
>mm_chr6_32697348_32698222
Length = 875
Score = 857 bits (443), Expect = 0.0
Identities = 446/447 (99%)
Strand = Plus / Minus
Query: 25 tgaggtaactgggctggcgagctggcttagcagctaaagggtgcttgttgctcttgcaga 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 tgaggtaactgggctggcgagctggcttagcagctaaagggtgcttgttgctcttgcaga 816
Query: 85 gaaccaagttcagttcctagcattcgtgtctggtggctcacaaccacctgtaactccagc 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 gaaccaagttcagttcctagcattcgtgtctggtggctcacaaccacctgtaactccagc 756
Query: 145 tccagctctgactctctcttctggccttagcaggcatccaccaacacacaggcacataaa 204
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tccagctctgactctgtcttctggccttagcaggcatccaccaacacacaggcacataaa 696
Query: 205 tacaaataaatctttaaaaagaaaggaagaaaatgcacagcgctggctttgtagtgattt 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tacaaataaatctttaaaaagaaaggaagaaaatgcacagcgctggctttgtagtgattt 636
Query: 265 ttttgttagcgtgggagctccgcttgctctcacagactactggctcaaggccattgtctg 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ttttgttagcgtgggagctccgcttgctctcacagactactggctcaaggccattgtctg 576
Query: 325 aactccacatcagagaggtatatattctgggggggggacctccacaactgatctgggggg 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 aactccacatcagagaggtatatattctgggggggggacctccacaactgatctgggggg 516
Query: 385 caatagccttgggttctgacagccattctgtcctagctgtgaggcggctgcccaggtcac 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 caatagccttgggttctgacagccattctgtcctagctgtgaggcggctgcccaggtcac 456
Query: 445 ttcctgaccatctccatgcctttgact 471
|||||||||||||||||||||||||||
Sbjct: 455 ttcctgaccatctccatgcctttgact 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
