Query= MSMg01no355_j12.b1 MSMg01no355_j12.b1 CHROMAT_FILE:
MSMg01no355_j12.b1 PHD_FILE: MSMg01no355_j12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:05 2005
(556 letters)
>mm_chr6_95581332_95582288
Length = 957
Score = 1046 bits (541), Expect = 0.0
Identities = 550/553 (99%), Gaps = 1/553 (0%)
Strand = Plus / Plus
Query: 5 gaattcctatacttctttgaattcctgatttctcctataatcacactggctcccttagtt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctatacttctttgaattcctgatttctcctataatcacactggctcccttagtt 264
Query: 65 aatccaggataatctttcagtctcaaggctaactgattagcaacctcaattgtatctgca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatccaggataatctttcagtctcaaggctaactgattagcaacctcaattgtatctgca 324
Query: 125 gagtccttttcaacacacaatgccacacattcacaggtgtaatgccagcagcaagagtcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagtccttttcaacacacaatgccacacattcacaggtgtaatgccagcagcaagagtcc 384
Query: 185 tcagagcagatttttggcctaccacaatacccaaaagaaataaaggcatgtcctgcagaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcagagcagatttttggcctaccacaatacccaaaagaaataaaggcatgtcctgcagaa 444
Query: 245 caactcaggatggcagagacagctcatcagttaagcgcacatactgctctaccagacagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caactcaggatggcagagacagctcatcagttaagcgcacatactgctctaccagacagg 504
Query: 305 agctcgattcccagtacccatgtgtggcagctgccggaaaccgtcttctggcctctgtgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agctcgattcccagtacccatgtgtggcagctgccggaaaccgtcttctggcctctgtgg 564
Query: 365 gcaactgcaagcacatacacaaactgaaatagaaactcacaatttaaaaaatgttacaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcaactgcaagcacatacacaaactgaaatagaaactcacaatttaaaaaatgttacaat 624
Query: 425 atttttttt-aaatctcaaacataaacattgatagcagcattaaccacaagcactggaat 483
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atttttttttaaatctcaaacataaacattgatagcagcattaaccacaagcactggaat 684
Query: 484 acaaaacataaagacccaccaagtgggagatgaatgaaatgtgctctgtctacacaatcg 543
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acagaacataaagacccaccaagtgggagatgaatgaaatgtgctctgtctacacaatcg 744
Query: 544 catgccactcaac 556
||||||||||||
Sbjct: 745 aatgccactcaac 757
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 957
Length adjustment: 10
Effective length of query: 546
Effective length of database: 947
Effective search space: 517062
Effective search space used: 517062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_j12.g1 MSMg01no355_j12.g1 CHROMAT_FILE:
MSMg01no355_j12.g1 PHD_FILE: MSMg01no355_j12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:05 2005
(244 letters)
>mm_chr6_95731269_95731912
Length = 644
Score = 470 bits (243), Expect = e-137
Identities = 243/243 (100%)
Strand = Plus / Minus
Query: 1 ataaaagcaatctattcttgctatgtctgccttgttcagatcaattcttcaattgcaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ataaaagcaatctattcttgctatgtctgccttgttcagatcaattcttcaattgcaaag 384
Query: 61 gcaataaacaaaacagatttaaatgtctgaattaaaatcaatattatttattccagaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gcaataaacaaaacagatttaaatgtctgaattaaaatcaatattatttattccagaatc 324
Query: 121 tacttccatttccttgaaatggtgtacagaaagtctttggagaatccctgcatgcccagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tacttccatttccttgaaatggtgtacagaaagtctttggagaatccctgcatgcccagt 264
Query: 181 gatgtgtctgaaaacagtttcccctaagtgcagcaaagagagtacctatatgtcaggaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gatgtgtctgaaaacagtttcccctaagtgcagcaaagagagtacctatatgtcaggaca 204
Query: 241 taa 243
|||
Sbjct: 203 taa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
