TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTTGTCTTCAGTTGAATTACATTCACTATCAAAGCTTGATCTGAA
GTATAATTAGGTTAGACTTGATAGATATAATAAATAANACACAATGCACT
CAATTAAACTGCANATCCGAGCATGAAANNNATTTANAAATCTGTTCGGG
GGGTGNGGGGGGGGAGCAGATAGAGGGAATGGACGAGCTGTGAGATTATT
CTATGAGTGTCTTANNNNTTTTGGATCGGAGTGGGGCTCTGCGTTTNNNN
TTATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNTNNNNTCNNNNNNNNTNN
NNNNNNTTTNNTTTTNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNCCCN
NCCCCCCCCCCCNNTCCCCCCCNCCCCCCCCCNCCCNCCCCCCNCCATCT
CCCCCCTTTTCTTCTTTCCCCCTTTTTTATCNTNCTTCCTTTCTTNCCCA
CCAACTATAAAAAAAAAACCTCCCCNNCCNCTCCCCCCTCCCCCCCNTCC
TCCCCCCCCCCCCCCNNNCCCCCCCCCCCCCCTCCCTCCCCTCTCCATTC
TTCCTTACTAAAAAATAAAAAA

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAAGCCCAGCATCCTGAAAGC
CAGGAAGAAACATGTTTAACTACTCACTAGACAGCTACCCTGGGGCAGAC
AGAAACGCCTAATACCCAGTGTATACGAAACAGAACTTGTGCTTGTCACA
CTGTCTTCCTCCGCTTTCCTTTTTCCTAGTTAATGCCACTGTTTCAATCC
GGGACCCCGAAACATAAAGGGCCTGCCTTTAACACTTCTTATTCTCTTAG
CCACGACTTCCTCCCTCGTCTCACGTCTCATTTGCTAATTCCCCAAGCTT
AACGTCTAGTCTCTCCCTTTACACGTCACACGCACAGGTAGCTATAGTGT
TATTTCTGCTACTGTTACCTTGCCTCAAGACCCCTGGTTTGATCATCCAA
AAGCAATCACTCACCAAATTAATTCTTCATTCCATCCAACCATACCTGCC
TAGCAGAACTATGGTTCCTTGTCCCCACTACACCCATTACAAATGCCCCA
CTAACAGAGAACCCCCGCCCTAGCTACCTCTCATGAAGCTGAGCTCCTGT
AGATCACTGGGTCATTCACTCAACAAATATTCCAAACACCAAGTGCTGCC
TCATGCCTCCTGGGACATTTGTATGAGCTGTCTATACCTTAACCGGTACT
TCTGTCTCAGGGNCTATATACAGTATAATTGAGATAAGGAAGGGAGGATG
GGTCTCTC

Query= MSMg01no355_l14.g1 MSMg01no355_l14.g1 CHROMAT_FILE:
MSMg01no355_l14.g1 PHD_FILE: MSMg01no355_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:15 2005
         (516 letters)



>mm_chr6_33002211_33003126
          Length = 916

 Score =  975 bits (504), Expect = 0.0
 Identities = 513/516 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   taaagcccagcatcctgaaagccaggaagaaacatgtttaactactcactagacagctac 60
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 taaagcccagcatcctgaaagccaggaaaaaacatgtttaactactcactagacagctac 260

                                                                       
Query: 61  cctggggcagacagaaacgcctaatacccagtgtatacgaaacagaacttgtgcttgtca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctggggcagacagaaacgcctaatacccagtgtatacgaaacagaacttgtgcttgtca 320

                                                                       
Query: 121 cactgtcttcctccgctttcctttttcctagttaatgccactgtttcaatccgggacccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cactgtcttcctccgctttcctttttcctagttaatgccactgtttcaatccgggacccc 380

                                                                       
Query: 181 gaaacataaagggcctgcctttaacacttcttattctcttagccacgacttcctccctcg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaacataaagggcctgcctttaacacttcttattctcttagccacgacttcctccctcg 440

                                                                       
Query: 241 tctcacgtctcatttgctaattccccaagcttaacgtctagtctctccctttacacgtca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctcacgtctcatttgctaattccccaagcttaacgtctagtctctccctttacacgtca 500

                                                                       
Query: 301 cacgcacaggtagctatagtgttatttctgctactgttaccttgcctcaagacccctggt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacgcacaggtagctatagtgttatttctgctactgttaccttgcctcaagacccctggt 560

                                                                       
Query: 361 ttgatcatccaaaagcaatcactcaccaaattaattcttcattccatccaaccatacctg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgatcatccaaaagcaatcactcaccaaattaattcttcattccatccaaccatacctg 620

                                                                       
Query: 421 cctagcagaactatggttccttgtccccactacacccattacaaatgccccactaacaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cctagcagaactatggttccttgtccccactacacccattacaaatgccccactaacaga 680

                                               
Query: 481 gaacccccgccctagctacctctcatgaagctgagc 516
           |||||||||||||||||||||||||||  |||||||
Sbjct: 681 gaacccccgccctagctacctctcatggcgctgagc 716



 Score = 58.7 bits (30), Expect = 1e-12
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 366 catccaaaagcaatcactcaccaaattaattcttcatt 403
           ||||||||||||||||||||||||||||| ||| ||||
Sbjct: 65  catccaaaagcaatcactcaccaaattaactctgcatt 102


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space:   458436
Effective search space used:   458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)