Query= MSMg01no355_p06.b1 MSMg01no355_p06.b1 CHROMAT_FILE:
MSMg01no355_p06.b1 PHD_FILE: MSMg01no355_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:32 2005
(426 letters)
>mm_chr6_3707396_3708222
Length = 827
Score = 777 bits (402), Expect = 0.0
Identities = 414/418 (99%), Gaps = 1/418 (0%)
Strand = Plus / Minus
Query: 10 gaattcttttctctc-cattatcaaatgtggggtacttccaatttctgacagatgctaag 68
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gaattcttttctctcaaattatcaaatgtggggtacttccaatttctgacagatgctaag 568
Query: 69 ccttttcaaaagctcttcagccaccccttttattaccattatcaaaaacatttaaatttt 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ccttttcaaaagctcttcagccaccccttttattaccattatcaaaaacatttaaatttt 508
Query: 129 ctcccaatattcagccacatttcagtccctgtgttttgaatttacaacacaggcagaatt 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ctcccaatattcagccacatttcagtccctgtgttttgaatttacaacacaggcagaatt 448
Query: 189 attttcaagctatggtcttgtcatactctattcaaaattgttcagttaatgtccaaggat 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 attttcaagctatggtcttgtcatactctattcaaaattgttcagttaatgtccaaggat 388
Query: 249 gtagtcctcttttaagacccttcatgataaaacctcatttaatttccccccatcaatgga 308
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtagccctcttttaagacccttcatgataaaacctcatttaatttccccccatcaatgga 328
Query: 309 atggagaaaatctcagcagctccttaattccagctcaggggctacaatcatacttggaaa 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 atggagaaaatctcagcagctccttaattccagctcaggggctacaatcatacttggaaa 268
Query: 369 actgaatccagattcacagtccatccttcacttgcaatcttgtgcccttgcttgtcaa 426
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 267 actgaatccagattcacagtccatccttcacttgcaaccttgtgcccttgcttgtcaa 210
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 827
Length adjustment: 9
Effective length of query: 417
Effective length of database: 818
Effective search space: 341106
Effective search space used: 341106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_p06.g1 MSMg01no355_p06.g1 CHROMAT_FILE:
MSMg01no355_p06.g1 PHD_FILE: MSMg01no355_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:33 2005
(230 letters)
>mm_chr6_3476462_3477089
Length = 628
Score = 427 bits (221), Expect = e-124
Identities = 225/227 (99%), Gaps = 2/227 (0%)
Strand = Plus / Plus
Query: 1 ccagtttttttaccaccagagaatcagtgaaaaacaatttgacattcggctaatcttagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccagtttttttaccaccagagaatcagtgaaaaacaatttgacattcggctaatcttagg 260
Query: 61 agtaatatttaatttacaattaaatctccatattcaaattttaagtactgtttatctttc 120
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 agtaatatttaatttacaattaaatctccatattcaaattttaagta--gtttatctttc 318
Query: 121 atttttgttgagtactagagaatcattaatactttctttgtaattatttatttgcctgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atttttgttgagtactagagaatcattaatactttctttgtaattatttatttgcctgcc 378
Query: 181 tgcctctgcttactccctacctctctctctctctctctctctctctc 227
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgcctctgcttactccctacctctctctctctctctctctctctctc 425
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 628
Length adjustment: 9
Effective length of query: 221
Effective length of database: 619
Effective search space: 136799
Effective search space used: 136799
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
