Query= MSMg01no359_n01.b1 MSMg01no359_n01.b1 CHROMAT_FILE:
MSMg01no359_n01.b1 PHD_FILE: MSMg01no359_n01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:23 2005
(550 letters)
>mm_chr6_11597747_11598696
Length = 950
Score = 646 bits (334), Expect = 0.0
Identities = 340/342 (99%)
Strand = Plus / Minus
Query: 209 gacaaatatttatttagcattcatattttattagttattgtaataacttagagatgatac 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950 gacaaatatttatttagcattcatattttattagttattgtaataacttagagatgatac 891
Query: 269 aaagtatacaagaagctgcatagttatatatgaaagtattagccatttttataaggaact 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 aaagtatacaagaagctgcatagttatatatgaaagtattagccatttttataaggaact 831
Query: 329 taaacatagactttgataccacatggttgaaggagccaatcctgtagataagaggctgga 388
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 830 taaacatagactttgataccacagggttaaaggagccaatcctgtagataagaggctgga 771
Query: 389 ataaatatataaatatatatgtattcaaatgaattctatttaatcatgccaatttcattt 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 ataaatatataaatatatatgtattcaaatgaattctatttaatcatgccaatttcattt 711
Query: 449 atcaaacaaaagaagcaaaattgttaggggttgtggatacaactgaaagatgtaaaataa 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 atcaaacaaaagaagcaaaattgttaggggttgtggatacaactgaaagatgtaaaataa 651
Query: 509 tatgatattcatataatatctatttataaaccacactataac 550
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tatgatattcatataatatctatttataaaccacactataac 609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_n01.g1 MSMg01no359_n01.g1 CHROMAT_FILE:
MSMg01no359_n01.g1 PHD_FILE: MSMg01no359_n01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:23 2005
(426 letters)
>mm_chr6_11427776_11428597
Length = 822
Score = 781 bits (404), Expect = 0.0
Identities = 419/426 (98%), Gaps = 4/426 (0%)
Strand = Plus / Plus
Query: 1 agaaggtgcagccagcacatccagcagatgtgcaacaacagtgagtgacactatgctttc 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 agaaggtgcagccagcacatccagcagatgtgcaagaacagtgagtgacactatgctttc 260
Query: 61 tactgctcctgtcactaaaccctcaagtccactaaaaaaaaaaaaaaaacaaagtctaac 120
|||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 261 tactgctcttgtcactaaaccctcaagtccact----aaaagaaaaaaacaaagtctaac 316
Query: 121 cacataggagattcagatgctttgtgtatctattgtctgggacatcactatgactccagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 cacataggagattcagatgctttgtgtatctattgtctgggacatcactatgactccagt 376
Query: 181 gccagactctgaatctacaagctgcacaaccaatattcacagagactccggatttattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gccagactctgaatctacaagctgcacaaccaatattcacagagactccggatttattct 436
Query: 241 tcctccatatgttatttgtaaagtcattgtttcaaaagtcatgagtgctttctgaaaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tcctccatatgttatttgtaaagtcattgtttcaaaagtcatgagtgctttctgaaaaac 496
Query: 301 ataaaatagagtaccgaacaaagaaataaatggttttggattcacactttaggccaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ataaaatagagtaccgaacaaagaaataaatggttttggattcacactttaggccaggat 556
Query: 361 caaattatctttgtgatggcgtcagcagaaccagtgtcagaatcacatgaatgaggaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 caaattatctttgtgatggcgtcagcagaaccagtgtcagaatcacatgaatgaggaatg 616
Query: 421 ccctca 426
||||||
Sbjct: 617 ccctca 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 822
Length adjustment: 9
Effective length of query: 417
Effective length of database: 813
Effective search space: 339021
Effective search space used: 339021
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
