Query= MSMg01no360_i21.b1 MSMg01no360_i21.b1 CHROMAT_FILE:
MSMg01no360_i21.b1 PHD_FILE: MSMg01no360_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:20 2005
(610 letters)
>mm_chr6_144473645_144474654
Length = 1010
Score = 1007 bits (521), Expect = 0.0
Identities = 554/565 (98%), Gaps = 2/565 (0%)
Strand = Plus / Minus
Query: 1 tggacttggaaaatttcaaacttaagggaaaaacagcccttgtattacccaccccttgct 60
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 764 tggacttggaaaatttcaaacttaagggaaaaacagaccttgtattacctaccccttgct 705
Query: 61 acaacttaccttccttgtgaacttcccttctctatgacccattttctgtcttacctttct 120
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 704 acaacttaccttccctgtgaactccccttctctatgacccattttctgtcttacctttct 645
Query: 121 gtgaccttcccctctctatgacctatctctttctgtcacctccttctctatgacctatcc 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gtgaacttcccctctctatgacctatctctttctgtcacctccttctctatgacctatcc 585
Query: 181 ctgtctatgacccacccctctctataatcttcctctctctaggaccaacctctttctatg 240
|||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 584 ctgtctatgacccagccctctctataatcttcctctctctagggccaacctctttctatg 525
Query: 241 acttgctttctatgtcttacacttctgtctgtgaccctccactttctatggcccaccttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 acttgctttctatgtcttacacttctgtctgtgaccctccactttctatggcccaccttt 465
Query: 301 tctatgcctgacctgtctctatgaccttcctctctatatgatc-taccactctctatgac 359
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 464 tctatgcctgacctgtctctatgaccttcctctctatatga-cgtaccactctctatgac 406
Query: 360 ccactcctctctgtgaccttcctctctatatgacctaccactctctatgacccacccctc 419
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ccactcctctctgtgacctttctctctatatgacctaccactctctatgacccacccctc 346
Query: 420 tctatgaccttcctctctatatgacctaccactctctatgacccacccctctctgtgacc 479
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tctgtgaccttcctctctatatgacctaccactctctatgacccacccctctctgtgacc 286
Query: 480 ttcctctctatatgacctaccactctctatgacccacccctctctgtgaccttcctctct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ttcctctctatatgacctaccactctctatgacccacccctctctgtgaccttcctctct 226
Query: 540 atatgacctaccactctctatgacc 564
|||||||||||||||||||||||||
Sbjct: 225 atatgacctaccactctctatgacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 106
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no360_i21.g1 MSMg01no360_i21.g1 CHROMAT_FILE:
MSMg01no360_i21.g1 PHD_FILE: MSMg01no360_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:20 2005
(455 letters)
>mm_chr6_144342288_144343142
Length = 855
Score = 872 bits (451), Expect = 0.0
Identities = 454/455 (99%)
Strand = Plus / Plus
Query: 1 caactcccagggtgggaagacaatcttatgcagctataagaagaggggcaggcgggcatg 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 caactcccagggtgggaagacaatcttatgtagctataagaagaggggcaggcgggcatg 260
Query: 61 tggctacaggtatggaagaggtactttcaggatgtatttatgtagatggatgcaaatgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggctacaggtatggaagaggtactttcaggatgtatttatgtagatggatgcaaatgtg 320
Query: 121 tccgttatattattctgtgcagaatccagtgtcctttcagtattgaagccacagcaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccgttatattattctgtgcagaatccagtgtcctttcagtattgaagccacagcaaata 380
Query: 181 catattattactacaacttaaatttccatgacaaataaaaacagggtctactcggctctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catattattactacaacttaaatttccatgacaaataaaaacagggtctactcggctctt 440
Query: 241 aaatgcaatccaacaccccccaagtggacaaatcaactcctttcaaagagataataccgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatgcaatccaacaccccccaagtggacaaatcaactcctttcaaagagataataccgt 500
Query: 301 ctcgagcctgccaaagagcttcttacagtgaatagtatcagttacacaaaaattaaggac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcgagcctgccaaagagcttcttacagtgaatagtatcagttacacaaaaattaaggac 560
Query: 361 atcttcagcatcacaaagatattttcaagtaagggaaaatttaataagttacacaaactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atcttcagcatcacaaagatattttcaagtaagggaaaatttaataagttacacaaactt 620
Query: 421 tttgctttctcatctgaggaagtgggggtaccagc 455
|||||||||||||||||||||||||||||||||||
Sbjct: 621 tttgctttctcatctgaggaagtgggggtaccagc 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
