Query= MSMg01no361_o20.b1 MSMg01no361_o20.b1 CHROMAT_FILE:
MSMg01no361_o20.b1 PHD_FILE: MSMg01no361_o20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:06 2005
(550 letters)
>mm_chr6_8605404_8606353
Length = 950
Score = 1017 bits (526), Expect = 0.0
Identities = 541/546 (99%)
Strand = Plus / Minus
Query: 5 gaattctcaggccattaaggcttggtgccaactaccttaaggtaaactgaagcctacctt 64
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 551 gaattctcaggccattaaggcttggtgccaactacctcaaggtaaactgaagcctacctt 492
Query: 65 aggaggagggttgcacatgggaggtagcactctcttgtggcattctactgtctctggctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aggaggagggttgcacatgggaggtagcactctcttgtggcattctactgtctctggctt 432
Query: 125 ctcccttgctgccagggtttccgttggctccctaccataaagatacagagtcctagacct 184
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 431 ctcccttgctgccagggtttccgttggctccctaccataaagatgcagagtcctagacct 372
Query: 185 tttcttctgctctgttcttcaattcatctttcccatttcttcttcactccattcctcact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tttcttctgctctgttcttcaattcatctttcccatttcttcttcactccattcctcact 312
Query: 245 tctggctttcccttcctctttctacaaccattggccacaactacagcccccatctttatc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tctggctttcccttcctctttctacaaccattggccacaactacagcccccatctttatc 252
Query: 305 ccttcctcttctattttcaaactgcctttcagcagagaatagaaaatagcaaaacaaaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ccttcctcttctattttcaaactgcctttcagcagagaatagaaaatagcaaaacaaaga 192
Query: 365 acagggaagtgtggtccgtgcctctaatccatctgtgcttgggaggtggaggaaagagca 424
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 191 acagggaagtgtggtccgtgcctctaatccatctgtgcttgggaggtggaggcaagagca 132
Query: 425 ttggaaagaaatgaaagaaaggtcatcttcagatatatatttcacacatatatgtatata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ttggaaagaaatgaaagaaaggtcatcttcagatatatatttcacacatatatgtatata 72
Query: 485 tacatacatataaatgtatatgtatgtacatattcatacatatacatatataaatatagt 544
||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 71 tacatacatataaatgtatatgtatatacatattcatacatatacataaataaatatagt 12
Query: 545 cttagt 550
||||||
Sbjct: 11 cttagt 6
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_o20.g1 MSMg01no361_o20.g1 CHROMAT_FILE:
MSMg01no361_o20.g1 PHD_FILE: MSMg01no361_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:07 2005
(418 letters)
>mm_chr6_8395930_8396747
Length = 818
Score = 793 bits (410), Expect = 0.0
Identities = 416/418 (99%)
Strand = Plus / Plus
Query: 1 tctgaatataaagttaaaagcactgaagttgtgaaatgccagtcttaaagctctcctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgaatataaagttaaaagcactgaagttgtgaaatgccagtcttaaagctctcctgcc 260
Query: 61 aacaataaatcccccttacggccctctctgcacaccacatcgatttaatagcccaactag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacaataaatcccccttacggccctctctgcacaccacatcgatttaatagcccaactag 320
Query: 121 cctttctgcacaccacattgctcatttaatagctcggctagctaccctccatcctttaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctttctgcacaccacattgctcatttaatagctcggctagctaccctccatcctttaca 380
Query: 181 ggaagcggttaattatggtttcctgggttttgcgtggttgtgttcaagtgttcctttcct 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaagctgttaattatggtttcctgggttttgcgtggttgtgttcaagtgttcctttcct 440
Query: 241 tttgaaatatttggttcattttattctctatatttctcctcttcactctatggcgtgatg 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgaaatatctggttcattttattctctatatttctcctcttcactctatggcgtgatg 500
Query: 301 atgtagttgaggagatgatgtagttgacaaagaatggtcccaaactaaaaatgttctaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgtagttgaggagatgatgtagttgacaaagaatggtcccaaactaaaaatgttctaag 560
Query: 361 ccttaattaccttagagtcagggttaaaacttgttgtctacattatctgtcctttggg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccttaattaccttagagtcagggttaaaacttgttgtctacattatctgtcctttggg 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
