Query= MSMg01no362_e21.b1 MSMg01no362_e21.b1 CHROMAT_FILE:
MSMg01no362_e21.b1 PHD_FILE: MSMg01no362_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:37 2005
(169 letters)
>mm_chr6_105834492_105835063
Length = 572
Score = 296 bits (153), Expect = 5e-85
Identities = 165/169 (97%), Gaps = 3/169 (1%)
Strand = Plus / Minus
Query: 4 ggaattctc-tttttgtatacctactcttgc-aaatcctctcaccatattgttattgtag 61
||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 372 ggaattctcttttttgtgtacctactcttgcaaaatcctctcaccatattgttattgtag 313
Query: 62 tcttgatcagtctgttttgtagattcttaaaggataggtttttatttctggtcaaaggaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tcttgatcagtctgttttgtagattcttaaaggataggtttttatttctggtcaaaggaa 253
Query: 122 tggaatctaactctgcccttgtatggactcctaatattcca-cctttaa 169
||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 252 tggaatctaactctgcccttgtatggactcctaatattccaacctttaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 572
Length adjustment: 8
Effective length of query: 161
Effective length of database: 564
Effective search space: 90804
Effective search space used: 90804
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no362_e21.g1 MSMg01no362_e21.g1 CHROMAT_FILE:
MSMg01no362_e21.g1 PHD_FILE: MSMg01no362_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:37 2005
(523 letters)
>mm_chr6_105664695_105665617
Length = 923
Score = 1011 bits (523), Expect = 0.0
Identities = 523/523 (100%)
Strand = Plus / Plus
Query: 1 actaagatactggatgtttagctcttcaacagtgaatatccaaagacagatttgttatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actaagatactggatgtttagctcttcaacagtgaatatccaaagacagatttgttatgg 260
Query: 61 agaagagggataatgtgttatattcctcaaatgaaggtgagcagctgttgtattataatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaagagggataatgtgttatattcctcaaatgaaggtgagcagctgttgtattataatt 320
Query: 121 gttttgacaatctagaaaccaaagcccttttctctaatatcctcagaggtttcgttataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttttgacaatctagaaaccaaagcccttttctctaatatcctcagaggtttcgttataa 380
Query: 181 tttgccattgcaatgaggagagtgataatcccctattccctgaataggcactgagaaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgccattgcaatgaggagagtgataatcccctattccctgaataggcactgagaaaga 440
Query: 241 acatttgtgattggttgttttccagcatccaaccctacattttcttcaagacagacattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatttgtgattggttgttttccagcatccaaccctacattttcttcaagacagacattt 500
Query: 301 aaagaattctgtaccttttcctgtatatttattttcttcttctggagtaggactttctac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaagaattctgtaccttttcctgtatatttattttcttcttctggagtaggactttctac 560
Query: 361 agtggtagaactttatttatcatttgcaatttaggaaatctgataaaattttattctgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtggtagaactttatttatcatttgcaatttaggaaatctgataaaattttattctgga 620
Query: 421 taacagggcccagtcctcattaccggacacccagttattagacactatcagggaataaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taacagggcccagtcctcattaccggacacccagttattagacactatcagggaataaaa 680
Query: 481 tgtaaatgctgatgtgggtgacagaattgaaaagcagttgaat 523
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtaaatgctgatgtgggtgacagaattgaaaagcagttgaat 723
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
