Query= MSMg01no362_l10.b1 MSMg01no362_l10.b1 CHROMAT_FILE:
MSMg01no362_l10.b1 PHD_FILE: MSMg01no362_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:11 2005
(435 letters)
>mm_chr6_23601064_23601899
Length = 836
Score = 584 bits (302), Expect = e-171
Identities = 332/342 (97%), Gaps = 2/342 (0%)
Strand = Plus / Minus
Query: 5 gaattctgccaatttctgagtatatcccaatttgttaagttaggttt-aaaaaaatgttg 63
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 342 gaattctgccaatttctgagtatatcccaatttgttaagttaggtttaaaaaaaatgttg 283
Query: 64 ttagtatcatctctttatgacctgtaaccattattactgtcattggttaacgttttaatc 123
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 282 ttagtatcatctctttatgacctgtaaccattgttactgtcattggttaactttttaatc 223
Query: 124 ttattggatttgctttggtttatttatttatttatttttttatttatttagtttttttcc 183
||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||
Sbjct: 222 ttattggatttgctttggtttatttatttatttatttagttagttagttagtttttttcc 163
Query: 184 aagacagggtttctctgtatatccctggctgtcctggaactcactctatagaccaggctg 243
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 162 aagacagggtttctctgtatagccctggctgtcctggaactcactctatagaccaggctg 103
Query: 244 tcctggaactcagaaatctgcctgcctctgcgtcccaagtgctgggattaaaggcatgtg 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 102 tcctggaactcagaaatctgcctgcctctgcgtcccaagtgctgggattaaaggcacgtg 43
Query: 304 tcaccactgcctggctttaagatttttttt-aattttaattt 344
|||||||||||||||||||||||||||||| |||||||||||
Sbjct: 42 tcaccactgcctggctttaagatttttttttaattttaattt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 836
Length adjustment: 9
Effective length of query: 426
Effective length of database: 827
Effective search space: 352302
Effective search space used: 352302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_l10.g1 MSMg01no362_l10.g1 CHROMAT_FILE:
MSMg01no362_l10.g1 PHD_FILE: MSMg01no362_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:11 2005
(466 letters)
>mm_chr6_23413422_23414287
Length = 866
Score = 878 bits (454), Expect = 0.0
Identities = 463/466 (99%)
Strand = Plus / Plus
Query: 1 tttgaaagaaaacacaaaacaattcctgggtataaccaatatctttattgatatgtaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgaaagaaaacacaaaacaattcctgggtataaccaatatctttattgatatgtaaaa 260
Query: 61 ataatttttacacaaaacattgataaagagggtttttctcctggtaggtggtggcgcata 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 ataatttttacacaaaacattgataaagagggtttttctcctggtaggtggtggcgtata 320
Query: 121 atcacaacttttagaagatgggggaagggaggataatgaggtagcgggcaacctgagcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcacaacttttagaagatgggggaagggaggataatgaggtagcgggcaacctgagcca 380
Query: 181 cacagtgagtctgcgaccagcctgggctacaaaccaagatccagtctcaacaacaaacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacagtgagtctgcgaccagcctgggctacaaaccaagatccagtctcaacaacaaacaa 440
Query: 241 acaagcaaacaaacagcacttcaaacagttcgaactgcgtcagcagtgtagaccaggaag 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 acaagcaaacaaacagcacttcaaacagtccgaactgcgtcagcagtgtagaccaggaag 500
Query: 301 agacacttggcacttaaaggtttaatattgactagaccctttaaaaataattgcttagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agacacttggcacttaaaggtttaatattgactagaccctttaaaaataattgcttagct 560
Query: 361 aaatatctatgttcttgtgtctacctgccttcagctagcattgatttatctgtctgtttg 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaatatttatgttcttgtgtctacctgccttcagctagcattgatttatctgtctgtttg 620
Query: 421 cttttcaccaggctccactgtgtagcaaagctcttgtattttaagt 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttttcaccaggctccactgtgtagcaaagctcttgtattttaagt 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
