TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCTCAGAATGATAATGCCATGGCATTCACATGGGACAGATCTGGTTGGG
GGTGGGGGAGTGCTGATCAGAGACCCTTCCTGTCCTTCTACTTCATCTTG
GCCTCCAGGAAGTATTAGACCTCAAGGCAAGATCAAATTTATTGGCCAAA
ATCAAATATTGAGGCCGAAGAACTAGACTAATGAGGCACTAGAGCCAATA
ACTCAGACACGTAATCTTTGTATCCATAAAAGACCAATAACCTGGCAAGC
TGCCATCTGGGGCAGCCATTTATGACAAGCCAAGGTAATCCATACTTTTC
ATAATTAACTTGTAAAATGCAATGTAATTAGCATCCCTGAAAAGGAGCAT
AAATATTGTTTTCTTTTTATTTCACCAGCCCATTCTTCCTTGCTCCTCAG
TAATACTTAACACATTTAGAATGACTCCACAGCTTTTAAAACTTCAACTG
GCTTAACACATAAGGTTTTTTTTCCTAAGACAGCAAGGACAATCATGGCT
CTGGTGAAAAAGTAACCCCTGAAAGTACAATAAACTCGTGGAGGCACTTA
AAATGCCCAAGGATGTGAGGTCTTTTTGCAGATTTATTATGTAGCCAGAA
TTGCACGTTTGTGAAAACTGTTAATGGAATGGAACAATGGGAAAGGAGAA
CAAATGTGNTTGATCCTCCCATATAAATCACG

NNNCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGCCAGCCTGGTCTACAG
AGTGAGTTCCAGGACAGACAAAGCTACAGAGAGAAGCTCTGACTCGAAAC
AACAACAAAAAACAAACAATCAAACAGAAACAAGAAAGAAAGAAGAGAAA
AAGAAACAAACAAACACAACAAGGGTTTTAGATGCTCAGCAACATGAGTT
TACTGACTTGTGCCTGATGGATAATTGAAAACTATGACCCCCATTAAAAC
AAATATCCAGGGAGCTAACTCAGTGTTTAGCCATGCCTGCTGCTCTTACA
GAGGGCCTGTGTTTGATTCTACATACCCACACTGGGCAGCTCATAGGACC
CAGGACTGGGAGGAGGTGAGTTGGAATTTACCTGGAAGCCTCCTGCTGGA
GGACTAGCTCCCAGGGTATCAGAAGGTACCATGCAAGCTGTTAAGGGAGG
AAAGTAACCAGTCACCATACCCAACTGTGACGCCTAGGGGCCACAACAAT
GATTGGTCCAGCAAGCTATCCTCAGTTGTGTATGCAATAGCGGCACCTTT
ATCTTGTGGGTAACCAACTGCTGTCTAACTGGACCTAAGACCCACTCAAT
AGGAGGAAATCCATGCCTGGAACTGCAGATTTAGCAAACTACTTGTGAGA
GAGCTCACGGACTCTAGAGGGGAAGCTACTACTGGTATGGCCCTAAACTA
AG

Query= MSMg01no363_g05.b1 MSMg01no363_g05.b1 CHROMAT_FILE:
MSMg01no363_g05.b1 PHD_FILE: MSMg01no363_g05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:04 2005
         (528 letters)



>mm_chr6_31668108_31669039
          Length = 932

 Score =  961 bits (497), Expect = 0.0
 Identities = 518/527 (98%), Gaps = 4/527 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctcagaatgataatgccatggcattcacatgggacagatctggttgggggtggg 64
           ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 731 gaattcctcagaaagataatgccatggcattcacgtgggacagatctggttgggggtggg 672

                                                                       
Query: 65  ggagtgctgatcagagacccttcctgtccttctacttcatcttggcctccaggaagtatt 124
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 671 ggagtgctgatcagagacccttcctgtccttctccttcatcttggcctccaggaagtatt 612

                                                                       
Query: 125 agacctcaaggcaagatcaaatttattggccaaaatcaaatattgaggccgaagaactag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 agacctcaaggcaagatcaaatttattggccaaaatcaaatattgaggccgaagaactag 552

                                                                       
Query: 185 actaatgaggcactagagccaataactcagacacgtaatctttgtatccataaaagacca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 actaatgaggcactagagccaataactcagacacgtaatctttgtatccataaaagacca 492

                                                                       
Query: 245 ataacctggcaagctgccatctggggcagccatttatgacaagccaaggtaatccatact 304
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 491 ataacctggcaagctgccatctggggcagccatttaggacaagccaaggtaatccatact 432

                                                                       
Query: 305 tttcataattaacttgtaaaatgcaatgtaattagcatccctgaaaaggagcataaatat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tttcataattaacttgtaaaatgcaatgtaattagcatccctgaaaaggagcataaatat 372

                                                                       
Query: 365 tgttttctttttatttcaccagcccattcttccttgctcctcagtaatacttaacacatt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tgttttctttttatttcaccagcccattcttccttgctcctcagtaatacttaacacatt 312

                                                                       
Query: 425 tagaatgactccacagcttttaaaacttcaactggcttaacacataagg----ttttttt 480
           |||||||||| ||||||||||||||||||||||||||||||||||||||    |||||||
Sbjct: 311 tagaatgactgcacagcttttaaaacttcaactggcttaacacataaggttttttttttt 252

                                                          
Query: 481 tcctaagacagcaaggacaatcatggctctggtgaaaaagtaacccc 527
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tcctaagacagcaaggacaatcatggctctggtgaaaaagtaacccc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 932
Length adjustment: 10
Effective length of query: 518
Effective length of database: 922
Effective search space:   477596
Effective search space used:   477596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)