Query= MSMg01no363_j06.b1 MSMg01no363_j06.b1 CHROMAT_FILE:
MSMg01no363_j06.b1 PHD_FILE: MSMg01no363_j06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:20 2005
(546 letters)
>mm_chr6_7699449_7700394
Length = 946
Score = 1025 bits (530), Expect = 0.0
Identities = 539/542 (99%)
Strand = Plus / Plus
Query: 5 gaattcaccctgacctacttcctagccacccgttcccagttgccatataaacctaacagt 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaccctgacctatttcctagccacccgttcccagttgccatataaacctaacagt 264
Query: 65 tctccagttctcagctgtagtcaggttcttccatactttctagacaggtagtgactacaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctccagttctcagctgtagtcaggttcttccatactttctagacaggtagtgactacaa 324
Query: 125 gccttgactgcttgcccactcctatggaatatgcctgcatgcatttgacagcttactcca 184
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 325 gccttgactgcttgcccactcctatggaatatgcctgcatgcatttgaccgcttactcca 384
Query: 185 tacttgccagactatactttcttccttaatgatgtcatgagaccctaatgttcctggacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tacttgccagactatactttcttccttaatgatgtcatgagaccctaatgttcctggacc 444
Query: 245 tactgcgataactgttagtcaactgttagtcccaggctcatgaaactccccagcagatgg 304
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 445 tactgcgataactgttagtcaactgttagtcccaggctcaggaaactccccagcagatgg 504
Query: 305 agtttcccaggaaaattataatgaagaaaggtgggtcacttagcaaaatcaagaatgtca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agtttcccaggaaaattataatgaagaaaggtgggtcacttagcaaaatcaagaatgtca 564
Query: 365 aaaagacttgtaagacatcttctgttggaccaaggaaagggaaaaatcccactcttcctc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaaagacttgtaagacatcttctgttggaccaaggaaagggaaaaatcccactcttcctc 624
Query: 425 tcccacagtgtatctccatggaatagggttttctctaaggcctgacttggagtcagcttc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcccacagtgtatctccatggaatagggttttctctaaggcctgacttggagtcagcttc 684
Query: 485 ccccaaacatcgtccccaaataagaacacttccttggaaaatagatcaggctcacctgca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccccaaacatcgtccccaaataagaacacttccttggaaaatagatcaggctcacctgca 744
Query: 545 ga 546
||
Sbjct: 745 ga 746
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space: 501696
Effective search space used: 501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_j06.g1 MSMg01no363_j06.g1 CHROMAT_FILE:
MSMg01no363_j06.g1 PHD_FILE: MSMg01no363_j06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:20 2005
(164 letters)
>mm_chr6_7889708_7890271
Length = 564
Score = 311 bits (161), Expect = 1e-89
Identities = 161/161 (100%)
Strand = Plus / Minus
Query: 1 attcaaggctattctttgtaacatacaaacttgccttaaacagttcaaaaaccaaaggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attcaaggctattctttgtaacatacaaacttgccttaaacagttcaaaaaccaaaggct 302
Query: 61 gagggtttacagctcaataatgaacctagcacagggctctggggtccattccaagtacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagggtttacagctcaataatgaacctagcacagggctctggggtccattccaagtacca 242
Query: 121 gaaagaaaagaggtgggggggagagggaaggagagggggtg 161
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaagaaaagaggtgggggggagagggaaggagagggggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 564
Length adjustment: 8
Effective length of query: 156
Effective length of database: 556
Effective search space: 86736
Effective search space used: 86736
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
