Query= MSMg01no363_j17.b1 MSMg01no363_j17.b1 CHROMAT_FILE:
MSMg01no363_j17.b1 PHD_FILE: MSMg01no363_j17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:22 2005
(607 letters)
>mm_chr6_117245343_117246345
Length = 1003
Score = 1038 bits (537), Expect = 0.0
Identities = 585/614 (95%), Gaps = 21/614 (3%)
Strand = Plus / Minus
Query: 11 actcaatggaaatggtttcttctttctgagactcatganaggagttgatgaagagaagag 70
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1003 actcaatggaaatggtttcttctttctgagactcatgaaaggagttgatgaagagaagag 944
Query: 71 gcagggaaaggcaggggagagagaaagagaagaagctggtaaaaggaaggataggaacaa 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 gcagggaaaggcaggggagagagaaagagaagaagctggtaaaaggaaggataggaacaa 884
Query: 131 gaggaggaatggaggagagaagaggaagggaggggaacagacatggaaagaagcagcaaa 190
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 gaggaggaatggaggtgagaagaggaagggaggggaacagacatggaaagaagcagcaaa 824
Query: 191 cagataagaaatgagaatacatttaaaagaagtcaaaaggaaacatagcagagaggaaag 250
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 cagataagaaatgagaatgcatttaaaagaagtcaaaaggaaacatagcagagaggaaag 764
Query: 251 agaagggaaatgaataactttccctcagaactgtgattcctagacttggttgggaggaat 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 agaagggaaatgaataactttccctcagaactgtgattcctagacttggttgggaggaat 704
Query: 311 cggatttgagtgggctgagtcctgaggattagaaggaatctctgggatggcagtgatttc 370
||||||||||||||||||| |||||||||||||| || ||||||||||||||| |||
Sbjct: 703 cggatttgagtgggctgagccctgaggattagaa----tccctgggatggcagtgacttc 648
Query: 371 tggagagactcaggactttgcaatgaggaaagtgggagtcacaaaaaacagggtgccaaa 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tggagagactcaggactttgcaatgaggaaagtgggagtcacaaaaaacagggtgccaaa 588
Query: 431 gggagattcaagtagtggttttctctaaacatgaggctcagaactcccaatcttaggaaa 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gggagattcaagtagtggttttctctaaacatgaggctcagaactcccaatcttaggaaa 528
Query: 491 ccccatcatttcctgggactagaaacgtccctggtgggccaggctgggatgagggcccct 550
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 527 ccccatcatttcctgggactagaaatgtccctggtgggccaggctgggatgagggcccct 468
Query: 551 agt-----------------acatccctgtacgtgaaggcaaggggcactggcaaggtgg 593
||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 467 agtccatgtgcccaagagccacatccctgtatgtgaaggcaaggggcactggcaaggtgg 408
Query: 594 gatttgggggttta 607
||||||||||||||
Sbjct: 407 gatttgggggttta 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1003
Length adjustment: 10
Effective length of query: 597
Effective length of database: 993
Effective search space: 592821
Effective search space used: 592821
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_j17.g1 MSMg01no363_j17.g1 CHROMAT_FILE:
MSMg01no363_j17.g1 PHD_FILE: MSMg01no363_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:22 2005
(419 letters)
>mm_chr6_117079514_117080332
Length = 819
Score = 803 bits (415), Expect = 0.0
Identities = 418/419 (99%)
Strand = Plus / Plus
Query: 1 ttccgtgggccccatccatcagcactaggcctgacaaatggtgcacccctgagtggacgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccgtgggccccatccatcagcactaggcctgacaaatggtgcacccctgagtggacgc 260
Query: 61 acagggacgcccaagttgatgctgcaccttgttttcttaataagcaatgaggtggcagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagggacgcccaagttgatgctgcaccttgttttcttaataagcaatgaggtggcagaa 320
Query: 121 gtgggactctggtaaacatcagggtcagccgtcttagggagtttttagtgtcaaaacgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgggactctggtaaacatcagggtcagccgtcttagggagtttttagtgtcaaaacgtg 380
Query: 181 aaagctgtctggggaacagaaccagcatcgagactcgtccttatagctcttgaggctggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagctgtctggggaacagaaccagcatcgagactcgtccttatagctcttgaggctggg 440
Query: 241 ctggttttagcagtgcctttgacggcttgccagagaagagggctccagggaaggtgtttc 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgggtttagcagtgcctttgacggcttgccagagaagagggctccagggaaggtgtttc 500
Query: 301 caaagccaagactcttcctctctttgatttgtatcatgcatgttgcatatcccatgtcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaagccaagactcttcctctctttgatttgtatcatgcatgttgcatatcccatgtcat 560
Query: 361 ggctattatgggatatgacaggggaagcaggtttctcagagtgggaaggtgggtttgca 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggctattatgggatatgacaggggaagcaggtttctcagagtgggaaggtgggtttgca 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
