Query= MSMg01no364_b17.b1 MSMg01no364_b17.b1 CHROMAT_FILE:
MSMg01no364_b17.b1 PHD_FILE: MSMg01no364_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:05 2005
(451 letters)
>mm_chr6_22115530_22116380
Length = 851
Score = 808 bits (418), Expect = 0.0
Identities = 441/450 (98%), Gaps = 4/450 (0%)
Strand = Plus / Minus
Query: 6 gaattctcttctgctttgatttctagcaagatccagcaaaactccgttgccaattgctta 65
|||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 832 gaattctcttctgcattgatttctagcaagatccagcaaaactccgttgccagttgttta 773
Query: 66 tttttaactctttctagaccctcaaatttagaagaaatgaaaaccatgggattatcctga 125
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 772 tttttaactctttctagaccctcaaatttagaagaaatgaaaaccatgggtttatcctga 713
Query: 126 caaaggaacttaaatattctcacctcttaaaa-ttaaaaaaaaaaaaaaaaaaaaa---a 181
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 712 caaaggaacttaaatattctcacctcttaaaatttaaaaaaaaaaaaaaaaaaaaaaaca 653
Query: 182 acctttgggcaaagacaaggatattgtcctgaggtgcttgtccaagcccaacttttacaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 acctttgggcaaagacaaggatattgtcctgaggtgcttgtccaagcccaacttttacaa 593
Query: 242 tctggctacttaaatggtttctgtttcttaacaaggaaaagaaaagccttgctcctgatc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tctggctacttaaatggtttctgtttcttaacaaggaaaagaaaagccttgctcctgatc 533
Query: 302 ctgatacagcagggtgttaggctgtaattaaagctaaaaccctgcacaagagtgaactga 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ctgatacagcagggtgttaggctgtaattaaagctaaaaccctgcacaagagtgaactga 473
Query: 362 aaccattcaaagttaatcaatatacctaatatgtcggtgactgaaagacctcccattggc 421
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 aaccattgaaagttaatcaatatacctaatatgtcggtgactgaaagacctcccattggc 413
Query: 422 acaatatctcatttacatggggcttttgtg 451
||||||||||||||||||||||||||||||
Sbjct: 412 acaatatctcatttacatggggcttttgtg 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_b17.g1 MSMg01no364_b17.g1 CHROMAT_FILE:
MSMg01no364_b17.g1 PHD_FILE: MSMg01no364_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:05 2005
(386 letters)
>mm_chr6_21923829_21924614
Length = 786
Score = 746 bits (386), Expect = 0.0
Identities = 386/386 (100%)
Strand = Plus / Plus
Query: 1 caacgatgaagattttaagaaagtattttatattcaacaggtatattcagctgcatgtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caacgatgaagattttaagaaagtattttatattcaacaggtatattcagctgcatgtac 260
Query: 61 tgtactccagagctgttatgttacactgtatataaatggttgcaaaaaacaaaaacaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtactccagagctgttatgttacactgtatataaatggttgcaaaaaacaaaaacaaaa 320
Query: 121 aacaaaatacaaacaaaaaaagtcagtccttctaaaaaggatttaagataatggttttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacaaaatacaaacaaaaaaagtcagtccttctaaaaaggatttaagataatggttttta 380
Query: 181 agatgcctttataataagctttgtttctttgtgaaactcattcagcaggctgaaggaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatgcctttataataagctttgtttctttgtgaaactcattcagcaggctgaaggaatt 440
Query: 241 ggtttatgtggtaaagtgggctggtgtcctctagagtacctgggtacataaacagaaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtttatgtggtaaagtgggctggtgtcctctagagtacctgggtacataaacagaaact 500
Query: 301 cctgtaggtaaaacctgatccgtgccattagtctctatgtttctgcatccagatagagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctgtaggtaaaacctgatccgtgccattagtctctatgtttctgcatccagatagagtg 560
Query: 361 cagctcacgctcaagggggtgggggc 386
||||||||||||||||||||||||||
Sbjct: 561 cagctcacgctcaagggggtgggggc 586
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 786
Length adjustment: 9
Effective length of query: 377
Effective length of database: 777
Effective search space: 292929
Effective search space used: 292929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
