Query= MSMg01no365_k19.b1 MSMg01no365_k19.b1 CHROMAT_FILE:
MSMg01no365_k19.b1 PHD_FILE: MSMg01no365_k19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:14 2005
(210 letters)
>mm_chr6_114345899_114346508
Length = 610
Score = 375 bits (194), Expect = e-109
Identities = 206/210 (98%)
Strand = Plus / Minus
Query: 1 tcacttcctaaggcctattatggtcttgttctacccatggggtttttagaaaaatcagca 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 410 tcacttcctaaggcctattatggtcttgttctacccatgggatttttagaaaaatcagca 351
Query: 61 ttttagaaacagtgtatcaggcattatttgaagcttctgttgttttttgggttttgtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ttttagaaacagtgtatcaggcattatttgaagcttctgttgttttttgggttttgtgtt 291
Query: 121 ttgtttattttgttgtcattttgtgactgacagagcatacggtaacctgggccatgtcta 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 290 ttgtttattttgttgtcattttgtgactgacagagcatagggtaacctgggccatgtcta 231
Query: 181 gctgatttcagccaactaccaagaggtagg 210
||||| |||||||||||||||||||||||
Sbjct: 230 gctgaagtcagccaactaccaagaggtagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no365_k19.g1 MSMg01no365_k19.g1 CHROMAT_FILE:
MSMg01no365_k19.g1 PHD_FILE: MSMg01no365_k19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:14 2005
(504 letters)
>mm_chr6_114195718_114196622
Length = 905
Score = 922 bits (477), Expect = 0.0
Identities = 495/501 (98%), Gaps = 1/501 (0%)
Strand = Plus / Plus
Query: 5 gcagcctcccacccaccaaacaggttgagaatgcctcttaattgatagagggtagaaacg 64
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 205 gcagcctcccacccgccaaacaggttgagagtgcctcttaattgatagagggtagaaacg 264
Query: 65 gtctggacattcctacagggaaagcatttgaatcaggatccgaactgaggtgtagccaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtctggacattcctacagggaaagcatttgaatcaggatccgaactgaggtgtagccaaa 324
Query: 125 tgtcatctctgacaggccacagggaaacacaagtgccacctaaaatgcttcctccagctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtcatctctgacaggccacagggaaacacaagtgccacctaaaatgcttcctccagctc 384
Query: 185 cctgcccacggggacagacggatggggaaggtccctttgggacatgctggtcaagggcag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cctgcccacggggacagacggatggggaaggtccctttgggacatgctggtcaagggcag 444
Query: 245 ttggttaatgcagactgagaccaaactgtccataggggaattgacctgagactttagaac 304
|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 445 ttggttaatgtagactgagaccaaactgtccataggggaattgacctgggactttagaac 504
Query: 305 ctcagccttgggacatcctgctcagccctcctgcagcctcctggtacttacaagcccatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctcagccttgggacatcctgctcagccctcctgcagcctcctggtacttacaagcccatt 564
Query: 365 tccagcttctttctgttacctcagtgcat-atcctatctatccagacagcaggacttgtt 423
|||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 565 tccagcttctttgtgttacctcagtgcattatcctatctatccagacagcaggacttgtt 624
Query: 424 acagagtgagctctctgatctggcctagcctcaggcctccctgctttgtgatctgcacct 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acagagtgagctctctgatctggcctagcctcaggcctccctgctttgtgatctgcacct 684
Query: 484 gacatttcacatatattgagc 504
|||||||||||||||||||||
Sbjct: 685 gacatttcacatatattgagc 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 905
Length adjustment: 10
Effective length of query: 494
Effective length of database: 895
Effective search space: 442130
Effective search space used: 442130
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
