Query= MSMg01no365_o03.b1 MSMg01no365_o03.b1 CHROMAT_FILE:
MSMg01no365_o03.b1 PHD_FILE: MSMg01no365_o03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:30 2005
(514 letters)
>mm_chr6_132457081_132457994
Length = 914
Score = 971 bits (502), Expect = 0.0
Identities = 511/514 (99%)
Strand = Plus / Plus
Query: 1 gttgtaattgaaatttatatatgaatagcctcaacaccatcagtcttaattaactatagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttgtaattgaaatttatatatgaatagcctcaacaccatcagtcttaattaactatagt 260
Query: 61 atatataaggacacatataagtgatagtgcttaagctatcctactgatcagagacattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atatataaggacacatataagtgatagtgcttaagctatcctactgatcagagacattga 320
Query: 121 ttatatcgaatttggatggaaatcattactgacactataaacagatgtgaacaaacacca 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 ttatatcgaatttggatggaaatcattactgacactataaacagatatgaacaaacacca 380
Query: 181 gccctaccccaatgaacagttgtacacagataatgtcagcaaatgcaatgagatattcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccctaccccaatgaacagttgtacacagataatgtcagcaaatgcaatgagatattcat 440
Query: 241 atactgatagtccttaccttcaatatctggggtactctcttacacataatttgtttctaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atactgatagtccttaccttcaatatctggggtactctcttacacataatttgtttctaa 500
Query: 301 tttactcttactgtgtgaccgtttagaatacggacactggcacctcatccttacctcatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttactcttactgtgtgaccgtttagaatacggacactggcacctcatccttacctcatc 560
Query: 361 ctgctgggcaaaagttccagtgtggagtaaagaatacaagatttcttgctttgataatca 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctactgggcaaaagttccagtgtggagtaaagaatacaagatttcttgctttgataatca 620
Query: 421 taaaataacataatatggaattcaacaatgccattattttgctcctccttataaagacag 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 621 taaaataacataatatggaattcaacgatgccattattttgctcctccttataaagacag 680
Query: 481 ccttgctccttccagcacacacttggaagaaact 514
||||||||||||||||||||||||||||||||||
Sbjct: 681 ccttgctccttccagcacacacttggaagaaact 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_o03.g1 MSMg01no365_o03.g1 CHROMAT_FILE:
MSMg01no365_o03.g1 PHD_FILE: MSMg01no365_o03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:30 2005
(577 letters)
>mm_chr6_132652944_132653921
Length = 978
Score = 1087 bits (562), Expect = 0.0
Identities = 571/574 (99%), Gaps = 1/574 (0%)
Strand = Plus / Minus
Query: 1 tgcagatccagaacccatcccctctgctggaacttacctcccttctggcctgtgccttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 tgcagatccagaacccatcccctctgctggaacttacctcccttctggcctgtgccttct 857
Query: 61 ggctgtgacttatcagcagcttgtctacccctctgaagacaccactgtctaaaggcttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 ggctgtgacttatcagcagcttgtctacccctctgaagacaccactgtctaaaggcttcc 797
Query: 121 aggagatctgctacaaccacggaacagcccccatagtcttaagactgtgttaggctttta 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 796 aggagatctgctacaaccacggaacagccctcatagtcttaagactgtgttaggctttta 737
Query: 181 attaatatattcaccttagagaataatgattaatatttcttttgtgtttagtctttataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 attaatatattcaccttagagaataatgattaatatttcttttgtgtttagtctttataa 677
Query: 241 actattttcagggggatatgcaggttcttttatttggtttactttgacaatattattgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 actattttcagggggatatgcaggttcttttatttggtttactttgacaatattattgag 617
Query: 301 tattaacttgt-agtatgcatcctgcatatttgtttttccaaatttattttctccctgct 359
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tattaacttgtcagtatgcatcctgcatatttgtttttccaaatttattttctccctgct 557
Query: 360 tttggcttcctattcattatatttatatctttcaaagagctccaataatgaaattgatca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tttggcttcctattcattatatttatatctttcaaagagctccaataatgaaattgatca 497
Query: 420 actttaaccttcttgtataagtttatggacaatccatgttaagaaaataatcttccatag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 actttaaccttcttgtataagtttatggacaatccatgttaagaaaataatcttccatag 437
Query: 480 acctttcaggttcttgtttttagattttatatttaagttgacaaccagaattctgttttg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 acctttcaggttcttgtttttagattttatatttaagttgacaaccagaattctgttttg 377
Query: 540 aatatataaaggaaactatctgagattggttttt 573
||||||||||||||||||||| ||||||||||||
Sbjct: 376 aatatataaaggaaactatctaagattggttttt 343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 978
Length adjustment: 10
Effective length of query: 567
Effective length of database: 968
Effective search space: 548856
Effective search space used: 548856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
