Query= MSMg01no366_d16.b1 MSMg01no366_d16.b1 CHROMAT_FILE:
MSMg01no366_d16.b1 PHD_FILE: MSMg01no366_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:01 2005
(462 letters)
>mm_chr6_86997106_86997967
Length = 862
Score = 845 bits (437), Expect = 0.0
Identities = 452/457 (98%)
Strand = Plus / Plus
Query: 6 ggaattcactctgcttaccaggctgccctcaaactcaaaaagatccacctgcttctgcct 65
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattcactctgcagaccaggctgccctcaaactcaaaaagatccacctgcttctgcct 265
Query: 66 cccaaatgcatatgccaccactgcctggttaactcaggggtttccttggaccaatatttc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cccaaatgcatatgccaccactgcctggttaactcaggggtttccttggaccaatatttc 325
Query: 126 aaaggacagtttaaccaaacgtgataataatgattattggctatagtagtgctgccttta 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aaaggacagtttaaccaaacgtgataataatgattattggctatagtagtgctgccttta 385
Query: 186 ttgagtaaaaagtttttgagttgtaacttttgagtatggtagttcattgaatcaaagatt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ttgagtaaaaagtttttgagttgtaacttttgagtatggtagttcattgaatcaaagatt 445
Query: 246 ccagtaattggaagatgcaccatcaccatggaaacacaaggaaagaatctacgcataatc 305
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ccagtaattggaagatgcaccgtcaccatggaaacacaaggaaagaatctacgcataatc 505
Query: 306 atactttaaatcaatgtgttaaatctgtaggtccgtcacctctagaaactgttctggaga 365
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 506 atactttaaatcaatgtgttaaatctgtaggtctgtcacctctagaaactgttctggaga 565
Query: 366 cactttcagaaggctctagggttatctagagtcatagattttatggaatgtctatatata 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cactttcagaaggctctagggttatctagagtcatagattttatggaatgtctatatata 625
Query: 426 ttaagggaatttattggaatagcttaccgtctatagt 462
||||||||||||||||||||||||||| |||||||||
Sbjct: 626 ttaagggaatttattggaatagcttactgtctatagt 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_d16.g1 MSMg01no366_d16.g1 CHROMAT_FILE:
MSMg01no366_d16.g1 PHD_FILE: MSMg01no366_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:01 2005
(449 letters)
>mm_chr6_87204539_87205390
Length = 852
Score = 859 bits (444), Expect = 0.0
Identities = 449/452 (99%), Gaps = 3/452 (0%)
Strand = Plus / Minus
Query: 1 ctcacataaagtcaggaaaatggaagtaaacctaatgtatcttatgagggaaaacagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ctcacataaagtcaggaaaatggaagtaaacctaatgtatcttatgagggaaaacagatc 593
Query: 61 atcataacaatggaacctcggggaggcgtttgcagcaggcaagatctgaatttaaagacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 atcataacaatggaacctcggggaggcgtttgcagcaggcaagatctgaatttaaagacg 533
Query: 121 tgtgactcagtggctgtccaggagagatggagggaggtctggttccagaagggcagatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tgtgactcagtggctgtccaggagagatggagggaggtctggttccagaagggcagatgc 473
Query: 181 tgggagcctggttattatttgcatctggcgtccatcacagggacaattcctgacttctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tgggagcctggttattatttgcatctggcgtccatcacagggacaattcctgacttctgt 413
Query: 241 ctgcagtgataaacagcagccacagggggctgtagtttccatcacactgggtgctcctgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ctgcagtgataaacagcagccacagggggctgtagtttccatcacactgggtgctcctgg 353
Query: 301 gcttcaatcctttctgcttggcagcccagaggcttaggagggaaggaaggcagaccacac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gcttcaatcctttctgcttggcagcccagaggcttaggagggaaggaaggcagaccacac 293
Query: 361 ccacacgcagctcaccgcccactctgggtctt---cttgtggccccagaagacagggggt 417
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 292 ccacacgcagctcaccgcccactctgggtcttctccttgtggccccagaagacagggggt 233
Query: 418 ctaacgctatttttaagttaggaaaactgaag 449
||||||||||||||||||||||||||||||||
Sbjct: 232 ctaacgctatttttaagttaggaaaactgaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 852
Length adjustment: 10
Effective length of query: 439
Effective length of database: 842
Effective search space: 369638
Effective search space used: 369638
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
