Query= MSMg01no367_c10.b1 MSMg01no367_c10.b1 CHROMAT_FILE:
MSMg01no367_c10.b1 PHD_FILE: MSMg01no367_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:13 2005
(512 letters)
>mm_chr6_132842127_132843038
Length = 912
Score = 951 bits (492), Expect = 0.0
Identities = 504/508 (99%)
Strand = Plus / Minus
Query: 5 gaattcatccaaacacaaacaagcttgaattatcctaaaatggtctctagataatgctga 64
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 712 gaattcatccaaacacaaacaagcttgaattattctaaaatggtctctagataatgctga 653
Query: 65 aggaaatatcgtggttttgtatgccaacatacaaattttttcccctttggaacaatttaa 124
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 652 aggaaatatcgtggttttgtatgccaacatacaaaatttttcccctttggaacaatttaa 593
Query: 125 aatatctggataagttgagaaagttatattctaataaacatataaaaagcaaaaagagtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 aatatctggataagttgagaaagttatattctaataaacatataaaaagcaaaaagagtt 533
Query: 185 gcactagtgtatagaaattcttagatacaagggttcattagactcttcagaaaggtgcta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gcactagtgtatagaaattcttagatacaagggttcattagactcttcagaaaggtgcta 473
Query: 245 cacaaagatatgtatatttttcaagtgttaatgtataaactactgtgtaataagcttgct 304
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 cacaatgatatgtatatttttcaagtgttaatgtataaactactgtgtaataagcttgct 413
Query: 305 gaaatcaagacttcttaagaggttaatactgagaataatacttattgatcactttatata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gaaatcaagacttcttaagaggttaatactgagaataatacttattgatcactttatata 353
Query: 365 caggcatgtatactcattgaaacacataaagacacattaaatggtgctaaaatttctttt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 caggcatgtatactcattgaaacacataaagacacattaaatggtgctaaaatttctttt 293
Query: 425 ctctagtgaaaaaaaatccagcttcctattttactcagcactatacatcaaactcacatt 484
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ctctagtgaaaaaaaattcagcttcctattttactcagcactatacatcaaactcacatt 233
Query: 485 tactgttttgattttaaatattgtttag 512
||||||||||||||||||||||||||||
Sbjct: 232 tactgttttgattttaaatattgtttag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_c10.g1 MSMg01no367_c10.g1 CHROMAT_FILE:
MSMg01no367_c10.g1 PHD_FILE: MSMg01no367_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:13 2005
(511 letters)
>mm_chr6_133037934_133038844
Length = 911
Score = 907 bits (469), Expect = 0.0
Identities = 497/511 (97%), Gaps = 9/511 (1%)
Strand = Plus / Minus
Query: 1 agaggaacaaaaatgtctacaagaattttaggtaacagagagcttactatatgaactttg 60
||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 561 agaggaacaaaaatgtctacaagaattttaggtaacagagagcttac------aa---tg 511
Query: 61 gaaagcatccattggtccctgtgcaaacttaaatttgatgtgtttaatgttgtttttatt 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ggaagcatccattggtccctgtgcaaacttaaatttgatgtgtttaatgttgtttttatt 451
Query: 121 ttatatgtcagtctagattttgttgccagttattaattacaattccccaacattatttgt 180
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 450 ttatatgtcagtctagattttgttgccaggtattaattacaattccccaaaattatttgt 391
Query: 181 ccagaaatcaaatattgagactaaatttgtataaagaaaaactatcaaagccaatacaaa 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 390 ccagaaatcaaatattgagactaaatttgtataaaaaaaaactatcaaagccaatacaaa 331
Query: 241 taattatatcttgattttgatgataaaactgagaattcagtgtttcttcctcatcatcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 taattatatcttgattttgatgataaaactgagaattcagtgtttcttcctcatcatcaa 271
Query: 301 caacagcaaaactaaaaaacaaacaaacaaacaaaagaacaaagcaaaaacaacagggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 270 caacagcaaaactaaaaaacaaacaaacaaacaaaagaacaaagcaaaaacaatagggtg 211
Query: 361 ctctggataaggtgtgtagtatgtggagaaagattaaactagctgccttggaaaatatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ctctggataaggtgtgtagtatgtggagaaagattaaactagctgccttggaaaatatat 151
Query: 421 aattttcacccaaaacactgtggacattagtgatttgtattttcttggtactgtatatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 aattttcacccaaaacactgtggacattagtgatttgtattttcttggtactgtatatat 91
Query: 481 gggtttttggcagtaaatgttttgaaagttc 511
|||||||||||||||||||||||||||||||
Sbjct: 90 gggtttttggcagtaaatgttttgaaagttc 60
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
