Query= MSMg01no367_o22.b1 MSMg01no367_o22.b1 CHROMAT_FILE:
MSMg01no367_o22.b1 PHD_FILE: MSMg01no367_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:14 2005
(516 letters)
>mm_chr6_8417832_8418747
Length = 916
Score = 973 bits (503), Expect = 0.0
Identities = 509/511 (99%)
Strand = Plus / Minus
Query: 6 aattctttttatgggttgatgtgtgcgtctgctattgctgtattgttttcctttccattt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 aattctttttatgggttgatgtgtgcgtctgctattgctgtattgttttcctttccattt 657
Query: 66 ttagattcagtacaagtcccgatcttccttctttccaaattcacacatttagtctccctg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ttagattcagtacaagtcccgatcttccttctttccaaattcacacatttagtctccctg 597
Query: 126 atcacatagatattttatagaccttctcctctttcatttgccttgtgattttacttgaag 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 atcacatagatattttatagaccttctcctctttcatttgccttgtgattttacttgaag 537
Query: 186 agaacagaataacacttcgtagcatggttatccttgcttagccgctcacccgctcccacc 245
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 536 agaacagaataacacttcgtagcatggttatccttgcttagctgctcacccgctcccacc 477
Query: 246 ttttttcgttctttcttctagccgtaacacttcttatttccaatcctccctgggtttggg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ttttttcgttctttcttctagccgtaacacttcttatttccaatcctccctgggtttggg 417
Query: 306 aaaaaaaaatagcttggcaatggttcactaagaattgtaatttaatcctttggagtaaca 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aaaaaaaaatagcttggcaatggttcactaagaattgtaatttaatcctttggagtaaca 357
Query: 366 ggcttttcatctgcgctccctgcaatgatccgcccaatccccacacaatcagttccttag 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ggcttttcatctgcgctccctgcaatgatccgcccaatccccacacaatcagttccttag 297
Query: 426 aaaagaacaatcaaccccaaagaaaagaaaagtgctagcaacatcagaaagaataggagg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 aaaagaacaatcaaccccaaagaaaagaaaagtgctagcaacatcagaaagaataggagg 237
Query: 486 ccttttatgaaacgtgtaaatcgaaattaac 516
|||||||| ||||||||||||||||||||||
Sbjct: 236 ccttttataaaacgtgtaaatcgaaattaac 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_o22.g1 MSMg01no367_o22.g1 CHROMAT_FILE:
MSMg01no367_o22.g1 PHD_FILE: MSMg01no367_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:14 2005
(494 letters)
>mm_chr6_8243711_8244604
Length = 894
Score = 948 bits (490), Expect = 0.0
Identities = 493/494 (99%)
Strand = Plus / Plus
Query: 1 agtttaattttgccttaaagctatttttagagttaatatctaatgcttttaaaaatcagc 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 agtttaattttgccttaaagctattcttagagttaatatctaatgcttttaaaaatcagc 260
Query: 61 caaggtacctttgggcatttaaattccttttgtgttcaaaaatgtcattagcttgaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaggtacctttgggcatttaaattccttttgtgttcaaaaatgtcattagcttgaaata 320
Query: 121 taaagatgctttctagggaaactggtttgcctagccagatcttgtaatttagttattttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaagatgctttctagggaaactggtttgcctagccagatcttgtaatttagttattttg 380
Query: 181 caatgtgatcctcaaaacccaaacaccaaggctgctttccacaaggccttgttgcctaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caatgtgatcctcaaaacccaaacaccaaggctgctttccacaaggccttgttgcctaga 440
Query: 241 cagtgacatcatgttttaagcatgtttagtttgcaaaggtcctgcttttgatccttggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagtgacatcatgttttaagcatgtttagtttgcaaaggtcctgcttttgatccttggtt 500
Query: 301 gtcactccttttatgcagcttctcctgaattacaaaggtactgaaagcaatttgcttcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcactccttttatgcagcttctcctgaattacaaaggtactgaaagcaatttgcttcat 560
Query: 361 taaggtctgttgctgacactgttgtgtttcatacctcattcttctctgagcctccttcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaggtctgttgctgacactgttgtgtttcatacctcattcttctctgagcctccttcat 620
Query: 421 taagaccatattcaaatttggatcatggctctactgctacacccatgccattatcatcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taagaccatattcaaatttggatcatggctctactgctacacccatgccattatcatcta 680
Query: 481 aatagcaattacat 494
||||||||||||||
Sbjct: 681 aatagcaattacat 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
