XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTG
TTTACCTCTGAGCCCCAATTTTTAATGGGGTAATTTGATTTTCTGGAGTT
CACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCCTATCTGATT
TAGGATAGGTAAAGATCCTTTCCCAATCTGTAGGTGGCCTTTTTGTCTTA
TTGACGGTGTCTTTTGCCTTACAGAAGCTTTGCAGTTTCATGAGGTCCCA
TTTGTCAACTCTCAATCTTACAGCACAAGCCATTGCTGTTCTATTCAGGA
ATTTTTTCCCCTGTGCCAGTATCTTCGAGGCTTTTCCCCACGTTCTCCTC
TATAAGTTTCAGTGTATCTGGTTTTATGTGGAGCTCCTTGATCCACTTAG
ATTTGACCTTAGTACAAGGAGATAGGAATGGATCAATTCGCATTCTTCTA
CATGATAACCAACAGTTGTGCCAGCACCATTTGTTAAAAATGCTGTCTTT
TTTCCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTGACCATAGG
TGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTAT
CTGTCACTATACCAGTATGATGCTGTTTTTATCACCATTGCTCTGTAGTA
AAGCTTTAGGTCAGGGATGGTGATTCCACCAGAGGTTCTTTTATCCTTGA
AAAGAGTTTTTGTCATCCCGGGTTTTTTGTTATTCN

TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTCAGCACTGACAACCTCCTAGGGTAATGAGA
CCAGCTGACCATCATTTATTTATGCCTTCAAAGGACTTTGGAAGCCCAGG
TAACAATGGGTGGAAGAACAAGTCTGTCATGTATTAATAAACAGGAAGGC
TGATCATGGGAGGTGGGTTCTCTTCCAAGAGGGATCACCAAGGACTAATG
GGCTCCCCGGAGCTTCAGCCCAGGCCTCTTTCTTCTAATGACTTATTGGT
TGAGGTTACCAGGAAAGAAAATTGTATTTCTCCCTCTTTTGTCTGGAGAA
ACTAAAGTCATTTTATTAGTAAATTCTTTTAAGAGAAGGCGAGATACACC
TACCTGGAATGCTCCCAGCACATATAGTAGGGTACTGGAATTTTAAGTAC
TGAGCACCTATGAAGTGCCAGACACCATGCTAGGAATGAGGACAGTGTAG
TTCCTCAAGTGTGGATTCAGTCTTTCTAGGTCCAGGGAAAAGTTAGTTTG
AAGGATACCAGATCAATTTACTTACAAGGACTTTTAGAGAATTTGTGTGC
TCCCTGGAGACTGAAAATATCAAAGACAAGTCTCAGGGGGCTTATGGGCA
GGCAGAAATATCCAGTGCATTGGAAACCGTGGCAGGAAAATTAATGCCCC
AAACCCGGGATATTATACAATGGGAAATTTTCTCCCCGTGGTAAAGGGTG
G

Query= MSMg01no368_g05.g1 MSMg01no368_g05.g1 CHROMAT_FILE:
MSMg01no368_g05.g1 PHD_FILE: MSMg01no368_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:49 2005
         (517 letters)



>mm_chr6_35453163_35454080
          Length = 918

 Score =  934 bits (483), Expect = 0.0
 Identities = 510/519 (98%), Gaps = 2/519 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcagcactgacaacctcctagggtaatgagaccagctgaccatcatttatttatgccttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagcactgacaacctcctagggtaatgagaccagctgaccatcatttatttatgccttc 260

                                                                       
Query: 61  aaaggactttggaagcccaggtaacaatgggtggaagaacaagtctgtcatgtattaata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaggactttggaagcccaggtaacaatgggtggaagaacaagtctgtcatgtattaata 320

                                                                       
Query: 121 aacaggaaggctgatcatgggaggtgggttctcttccaagagggatcaccaaggactaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacaggaaggctgatcatgggaggtgggttctcttccaagagggatcaccaaggactaat 380

                                                                       
Query: 181 gggctccccggagcttcagcccaggcctctttcttctaatgacttattggttgaggttac 240
           |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggctccccggagctttaggccaggcctctttcttctaatgacttattggttgaggttac 440

                                                                       
Query: 241 caggaaagaaaattgtatttctccctcttttgtctggagaaactaaagtcattttattag 300
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggaaagaaaattgtatttccccctcttttgtctggagaaactaaagtcattttattag 500

                                                                       
Query: 301 taaattcttttaagagaaggc-gagatacacctacctggaatgctcccagcacatatagt 359
           ||||||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||
Sbjct: 501 taaattcttttaagagaaggcagagatacatctacccgggatgctcccagcacatatagt 560

                                                                       
Query: 360 agggtactggaatttt-aagtactgagcacctatgaagtgccagacaccatgctaggaat 418
           ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agggtactggattttttaagtactgagcacctatgaagtgccagacaccatgctaggaat 620

                                                                       
Query: 419 gaggacagtgtagttcctcaagtgtggattcagtctttctaggtccagggaaaagttagt 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaggacagtgtagttcctcaagtgtggattcagtctttctaggtccagggaaaagttagt 680

                                                  
Query: 479 ttgaaggataccagatcaatttacttacaaggactttta 517
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttgaaggataccagatcaatttacttacaaggactttta 719


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 918
Length adjustment: 10
Effective length of query: 507
Effective length of database: 908
Effective search space:   460356
Effective search space used:   460356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)