Query= MSMg01no368_g07.b1 MSMg01no368_g07.b1 CHROMAT_FILE:
MSMg01no368_g07.b1 PHD_FILE: MSMg01no368_g07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:49 2005
(273 letters)
>mm_chr6_73161043_73161715
Length = 673
Score = 507 bits (262), Expect = e-148
Identities = 268/270 (99%), Gaps = 1/270 (0%)
Strand = Plus / Minus
Query: 5 ggaattctgtttatt-ccaataatatccttttaaattctcatatttaattttcagctttt 63
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ggaattctgtttattgtcaataatatccttttaaattctcatatttaattttcagctttt 528
Query: 64 gttttcgatatatatacatatatatcacagatatatatgtaaataacagatataactaat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gttttcgatatatatacatatatatcacagatatatatgtaaataacagatataactaat 468
Query: 124 tctaatattcctgcctttatgactgaaccaattaatttatttagttttcaaactatgacc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tctaatattcctgcctttatgactgaaccaattaatttatttagttttcaaactatgacc 408
Query: 184 cataggtcaaattgaacactctaatcttttggattgatggctgccgcatccatttatttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 cataggtcaaattgaacactctaatcttttggattgatggctgccgcatccatttatttg 348
Query: 244 cataatgcccaagagttcttttctgcttcc 273
||||||||||||||||||||||||||||||
Sbjct: 347 cataatgcccaagagttcttttctgcttcc 318
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 673
Length adjustment: 9
Effective length of query: 264
Effective length of database: 664
Effective search space: 175296
Effective search space used: 175296
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no368_g07.g1 MSMg01no368_g07.g1 CHROMAT_FILE:
MSMg01no368_g07.g1 PHD_FILE: MSMg01no368_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:49 2005
(490 letters)
>mm_chr6_72957414_72958303
Length = 890
Score = 855 bits (442), Expect = 0.0
Identities = 478/490 (97%), Gaps = 1/490 (0%)
Strand = Plus / Plus
Query: 1 aggcccttaagaaaggggctcacccagagctggggatgtagctcagaaggaagagtcctt 60
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 202 aggcccttaagaaaggggctcacccggagctggggatgcagctcagaaggaagagtcctt 261
Query: 61 gtttaacatccatgaagccctggacctcatccctcgcgccacacaaatggttggtggcac 120
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gcttaacatccgtgaagccctggacctcatccctcgcgccacacaaatggttggtggcac 321
Query: 121 atgcctataatcccagcattcaagaagcaaaggccaaggatcagaaactcagggctatcc 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 322 atgcctataatcccagcattcaagaagcaaaggccaaggatcagaaactc-gggctatcc 380
Query: 181 ccatctgcatagcgaggccagcctgagctatgtgtgattatctcaaaaaacgaggcagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 ccatctgcatagcgaggccagcctgagctatgtgtgattatctcaaaaaacaaggcagga 440
Query: 241 ggaggggcttacacagccctgggctgagtagcgattctgctttctgtcacacgaggacat 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaggggcttacacagcactgggctgagtagcgattctgctttctgtcacacgaggacat 500
Query: 301 agcaaaagaccccaaagacttatttgattttgaactctatttcagttctctttggattag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcaaaagaccccaaagacttatttgattttgaactctatttcagttctctttggattag 560
Query: 361 ccaatctatgtaaatgtctgtggatgcgcactcatttaggacaagggccttacctacagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccaatctatgtaaatgtctgtggatgcgcactcatttaggacaagggccttacctacagg 620
Query: 421 tgggaagactatcacactggtagtaaatctctccaactctcagggcgggggctggagcta 480
||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 621 tgggaagactaacacactggtagtaaatctctccaactttcagggcctgggctggagcta 680
Query: 481 aggctggggt 490
|||||||||
Sbjct: 681 gggctggggt 690
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
