Query= MSMg01no368_l10.b1 MSMg01no368_l10.b1 CHROMAT_FILE:
MSMg01no368_l10.b1 PHD_FILE: MSMg01no368_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:14 2005
(471 letters)
>mm_chr6_22028690_22029560
Length = 871
Score = 851 bits (440), Expect = 0.0
Identities = 461/468 (98%)
Strand = Plus / Plus
Query: 4 ggaattcaaggttcttctgttgtcatggtcaaaacatagaggagtccatggggaaaattg 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaaggttcttatgttgtcatggtcaaaacatagaggagtccatggggaaaattg 263
Query: 64 gttttgtagaactgtgtgactttgacacttccactgaaagaactgaatgaagggcactta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gttttgtagaactgtgtgactttgacacttccactgaaagaactgaatgaagggcactta 323
Query: 124 cagcttgcatttgctgaatgcttgataggcgtgtgattgatggatcggttagttggtggg 183
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 324 cagcttgcatttgctgaatgcttgataggcgtgtgattgatgggtcggttagttggtggg 383
Query: 184 gattttgtacaatgactactccgtttaaagcgcgttgctgtgttgtgtcattgagctggt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gattttgtacaatgactactccgtttaaagcgcgttgctgtgttgtgtcattgagctggt 443
Query: 244 cgttccacatactacagggcatggattgcatctcatttcctataacagaaggcatgtgat 303
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 444 cgttccacatactacagggcatggattacatctcatttcctataacagaaggcatgtgat 503
Query: 304 gcttttgcccccaaagagtatggtattgaagtgttgtcttattgatgtgtatatatttat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcttttgcccccaaagagtatggtattgaagtgttgtcttattgatgtgtatatatttat 563
Query: 364 acatttgcggcatgacatgtccttctgtgataacagcatggcaaacacctctgaggccat 423
||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 564 acatttgtggtatgacatgtccttctgtgataacagcatggcaaagacctctgaggccat 623
Query: 424 caagaggaattcatcatccactggcacacatagaagtgcaatgattcc 471
||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caagaggaagtcatcatccactggcacacatagaagtgcaatgattcc 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_l10.g1 MSMg01no368_l10.g1 CHROMAT_FILE:
MSMg01no368_l10.g1 PHD_FILE: MSMg01no368_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:14 2005
(361 letters)
>mm_chr6_22275934_22276694
Length = 761
Score = 661 bits (342), Expect = 0.0
Identities = 355/360 (98%), Gaps = 1/360 (0%)
Strand = Plus / Minus
Query: 1 actgtagagacgagtactccagattgctgtctggacagaggtaatcactatgtttgttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 actgtagagacgagtactccagattgctgtctggacagaggtaatcactatgtttgttat 405
Query: 61 ttatcatagctatggaggtgcgaacgaactgcagaccctgcctgggctctgctcatttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ttatcatagctatggaggtgcgaacgaactgcagaccctgcctgggctctgctcatttct 345
Query: 121 agtgctcagggaagctgccccccaagatgcttaaagtagccatagctggtggcaggtata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 agtgctcagggaagctgccccccaagatgcttaaagtagccatagctggtggcaggtata 285
Query: 181 tgaggtaaaactgctcaaactatgatttgaaagtgtatagtgtttatgcctttcccttaa 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tgaggtaaaactgttcaaactatgatttgaaagtgtatagtgtttatgcctttcccttaa 225
Query: 241 ggttcattctttctttctttttgttttttttgttttttgttttgtttgtttgtttgtttt 300
|| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 224 gggtcattctttctttctttttgttttttt-gttttttgttttgtttgtttgtttgtttt 166
Query: 301 aaggcatttattgtanaaaagcagagagagggagagagtanagaagtagaggtgtggagg 360
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 165 aaggcatttattgtagaaaagcagagagagggagagagtagagaagtagaggtgtggagg 106
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
