XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAT
AAAGTACCATAAAAATTACATTAAAAAGTAAAGAAGGGCCAGGCAGTGGT
GGTGCACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTC
TGAGTTCAAGGCCAGTCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGG
CTATACAGAGAAACCCTGTCTCGAGAAAAAAAAAAAAGTAAAGGGTATGT
CTTTGAAAGTCATAGGAAGCATTTTTAAAGGCTTACCCTACTACTGGCCC
CACAACATTATTGTTTTATCTATTCCATGCACAAGTTTGGAAAGAAGCAG
GAATTATGAACAAAAAAGATACTCACATACATGCAATGTATTTACATCTG
TAATGCTTCCAGCAGTTATGTGGCCATAGCTGTGGAAACTGAATGCTATG
CATATTTCACACATTTTTTTTTTATAAAAACAGTTAAATTCAGGGAATTT
TGCCTTAGCATAACTAGGCAGGTTAATATTAGAATGCCAACTATTTCCAA
TTGTTTTGTATATATTAAGCTTCATATGACTATTTCACACAAACACAATA
TGTATTTTCTTTGTTTCCTCTATTACTTGGCACCCCTGTGCTTACTTTAT
GAAATGATTGTATTATCAGCAATAATAAATCTAGAGATTATGGATTATAG
TTAGTCTTGGAGTGACTATTTTTGATAAA

TGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCACTACCCCAGTCTCTTATGGTCATTTT
AGAGATAAAGTTCTATGGTGTTTGACAACACTATGTTTCAATCATAAAAT
TGTTTATTATGCTAAAGAAATATTCTGTGGACTCTGACTATTCACCATGC
TCTCTTCTTCTTCCAATTTTTGGGCTGTTTTGCCTTTTAAATTAGTATAT
TTAATCTAGGCCAAATCATAGTCATTCTTGCTGTTGGAGAATCCAGTATT
GTTATTTTAGGTCAGTAGAATGCTAAAAAAAAAACAAAAACCCAAAACAA
AACAAACAAACAAAAAAACCAAAGAAACAAACAAACAAACAAACAAAACT
GGTGACATCTTTCACAGAAAGTATGAAGTAAACCCCTTGGAAAGGCAGGA
TCCTTTTTCTGTTTAACTCATCTGAAGGATTCTTTTATGCATTTTCAAAT
GTAGAGACTGTTCTTCCCTTTAGCACATCTATGCCTCCTGATATTAGGTT
TTGTTTATCAATAGTTTCCCAAGGCCCTGACATGAGAATATCTGAGTCTT
TATTGTTCTTGTTCCTTCCCCTGTGACTATCCTTTATTCCTCACTCTATT
TTGTTCTAGGGATATTCTAATTGTTCCAGAAAAAAAAATAAAGGTTTTAA
AAATTCTGATTCCATTCTTACATGGCCCATGGATTCCTTTTTTAAAACAC
C

Query= MSMg01no368_m07.g1 MSMg01no368_m07.g1 CHROMAT_FILE:
MSMg01no368_m07.g1 PHD_FILE: MSMg01no368_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:18 2005
         (524 letters)



>mm_chr6_63613811_63614734
          Length = 924

 Score =  961 bits (497), Expect = 0.0
 Identities = 518/527 (98%), Gaps = 5/527 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cactaccccagtctcttatggtcattttagagataaagttctatggtgtttgacaacact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cactaccccagtctcttatggtcattttagagataaagttctatggtgtttgacaacact 259

                                                                       
Query: 61  atgtttcaatcataaaattgtttattatgctaaagaaatattctgtggactctgactatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atgtttcaatcataaaattgtttattatgctaaagaaatattctgtggactctgactatt 319

                                                                       
Query: 121 caccatgctctcttcttcttccaatttttgggctgttttgccttttaaattagtatattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 caccatgctctcttcttcttccaatttttgggctgttttgccttttaaattagtatattt 379

                                                                       
Query: 181 aatctaggccaaatcatagtcattcttgctgttggagaatccagtattgttattttaggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aatctaggccaaatcatagtcattcttgctgttggagaatccagtattgttattttaggt 439

                                                                       
Query: 241 cagtagaatgctaaaaaaaaaa---caaaaacccaaaacaaaacaaacaaacaaaaaaac 297
           ||||||||||||||||||||||   |||||||  ||||||||||||||||||||||||||
Sbjct: 440 cagtagaatgctaaaaaaaaaaacccaaaaac--aaaacaaaacaaacaaacaaaaaaac 497

                                                                       
Query: 298 caaagaaacaaacaaacaaacaaacaaaactggtgacatctttcacagaaagtatgaagt 357
           |||  || ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 498 caaccaaccaaacaaacaaacaaacaaaactggtgacatctttcagagaaagtatgaagt 557

                                                                       
Query: 358 aaaccccttggaaaggcaggatcctttttctgtttaactcatctgaaggattcttttatg 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aaaccccttggaaaggcaggatcctttttctgtttaactcatctgaaggattcttttatg 617

                                                                       
Query: 418 cattttcaaatgtagagactgttcttccctttagcacatctatgcctcctgatattaggt 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cattttcaaatgtagagactgttcttccctttagcacatctatgcctcctgatattaggt 677

                                                          
Query: 478 tttgtttatcaatagtttcccaaggccctgacatgagaatatctgag 524
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tttgtttatcaatagtttcccaaggccctgacatgagaatatctgag 724


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space:   469796
Effective search space used:   469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)