Query= MSMg01no369_n04.b1 MSMg01no369_n04.b1 CHROMAT_FILE:
MSMg01no369_n04.b1 PHD_FILE: MSMg01no369_n04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:39 2005
(165 letters)
>mm_chr6_125812882_125813446
Length = 565
Score = 273 bits (141), Expect = 5e-78
Identities = 159/165 (96%)
Strand = Plus / Minus
Query: 1 tgcattcctctggactcacacatacacatcagagttggccatttgtgggaagtagagagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tgcattcctctggactcacacatacacatcagagttggccatttgtgggaagtagagagc 306
Query: 61 tacaacagaaaggacacagccctaacagcaaaccaaaaatatcccacaagtctaagtatc 120
|||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||
Sbjct: 305 tacaacagaaaggacacagccctaacggcaaaccaaaaatataccacaagtttaagtatc 246
Query: 121 ctcaccaatgtgaatagtatattattattttacatccatactgct 165
||||||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 245 ctcaccaatgtgaatagcacattattattttatatccatactgct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 165
Length of database: 565
Length adjustment: 8
Effective length of query: 157
Effective length of database: 557
Effective search space: 87449
Effective search space used: 87449
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no369_n04.g1 MSMg01no369_n04.g1 CHROMAT_FILE:
MSMg01no369_n04.g1 PHD_FILE: MSMg01no369_n04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:39 2005
(124 letters)
>mm_chr6_125586345_125586871
Length = 527
Score = 224 bits (116), Expect = 1e-63
Identities = 121/124 (97%), Gaps = 3/124 (2%)
Strand = Plus / Plus
Query: 1 tgtatgattgtgtctctacacaaatgcttatccattgtgcacctgtgctgtttcccttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtatgattgtgtctctacacaaatgcttatccattgtgcacctgtgctgtttcccttaa 260
Query: 61 acatgattgatgggttgagtccatgtatctcattttttt---agctctccagagacttcc 117
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 acatgattgatgggttgagtccatgtatctcattttttttttagctctccagagacttcc 320
Query: 118 agcc 121
||||
Sbjct: 321 agcc 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 124
Length of database: 527
Length adjustment: 8
Effective length of query: 116
Effective length of database: 519
Effective search space: 60204
Effective search space used: 60204
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
