Query= MSMg01no370_i15.b1 MSMg01no370_i15.b1 CHROMAT_FILE:
MSMg01no370_i15.b1 PHD_FILE: MSMg01no370_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:38 2005
(490 letters)
>mm_chr6_15513936_15514825
Length = 890
Score = 855 bits (442), Expect = 0.0
Identities = 475/486 (97%)
Strand = Plus / Plus
Query: 5 gaattccatccctttatgcctgtttttaattcctcagagtaattagatcttgagaatttc 64
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcgatccctttatgcctgattttaattcctcagagtaattagatcttgagaatttc 264
Query: 65 ctgtaggttgctaagaattcagctcttcatttagaaggtcactatgatgttataatctgt 124
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 265 ctgtaggttgctaagaattcagctcttcatttagaaagccactatgatgttataatctgt 324
Query: 125 ccttctatgtattctgtcaagaagaggttcaggctatttagcataacacaatgccagaaa 184
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccttctatgtattctgtcaagaaaaggttcaggctatttagcataacacaatgccagaaa 384
Query: 185 taaaggttcatggatgctcaaagttacttgggttggtcttcacagcctaaagctactgga 244
||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 385 taaaggttcatggatgcccaaagttacttgggttgatcttctcagcctaaagctactgga 444
Query: 245 tttgtgttacatggctttccatgccatccttggaattctgattaatcaacttgctattgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttgtgttacatggctttccatgccatccttggaattctgattaatcaacttgctattgg 504
Query: 305 tttagagacccatggtctctcctacctaccttaaacattttctataccttgtgcatgacc 364
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 505 tttagagacccatggtctctcctacctaccttacacattttctataccttgtgcatggcc 564
Query: 365 ttcatttatttctgtgagtttcattgtgccagacatagagaacttcctgtagttgttcaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttcatttatttctgtgagtttcattgtgccagacatagagaacttcctgtagttgttcaa 624
Query: 425 taaacattgatttcatcgaccaaacaacaatatgcatctttcatataacttgagaaaact 484
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 625 taaacattgatttcatcgaccaaacaacaatatgcacctttcatataacttgagaaaact 684
Query: 485 attcca 490
||||||
Sbjct: 685 attcca 690
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_i15.g1 MSMg01no370_i15.g1 CHROMAT_FILE:
MSMg01no370_i15.g1 PHD_FILE: MSMg01no370_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:38 2005
(446 letters)
>mm_chr6_15704332_15705177
Length = 846
Score = 700 bits (362), Expect = 0.0
Identities = 374/378 (98%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 69 aaatcaaaaaataaataaatacaaaaaaagaaaaaccctcaaagcactaaggtttaatgt 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 aaatcaaaaaataaataaatacaaaaaaagaaaaaccctcaaagcactaaggtttaatgt 787
Query: 129 ggtgacacagacctgtaatcccaccacttaggagtcagagacactctgatctctatgaac 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 ggtgacacagacctgtaatcccaccacttaggagtcagagacactctgatctctatgaac 727
Query: 189 tcaaggccagcctgatctaaataggaaattccagggcagctagggctacatattgagacg 248
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 726 tcaaggccagcctgatctaaataggaaattccagggcagctagggctacatactgagacg 667
Query: 249 ctgtctattaaagaaccaaaagaagtatagatttcatttttgtggatttttattatttct 308
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ctgtcta-aaaagaaccaaaagaagtatagatttcatttttgtggatttttattatttct 608
Query: 309 atagagaatgcagaaatgtgagcatttgtgacactgtgctatatattacctattttttgg 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 atagagaatgcagaaatgtgagcatttgtgacactgtgctatatattacctattttttgg 548
Query: 369 ctaggtagtatttattatgtattagggctatgatacgactatgtcatgcttataccataa 428
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 547 ctaggtagtatttattatgtattagggctatgatatgactatgtcatgcttataccataa 488
Query: 429 atcattttacactaaggt 446
||||||||||||||||||
Sbjct: 487 atcattttacactaaggt 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
