Query= MSMg01no373_e18.b1 MSMg01no373_e18.b1 CHROMAT_FILE:
MSMg01no373_e18.b1 PHD_FILE: MSMg01no373_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:14 2005
(512 letters)
>mm_chr6_21463329_21464240
Length = 912
Score = 669 bits (346), Expect = 0.0
Identities = 352/354 (99%)
Strand = Plus / Minus
Query: 7 gaattctctatataatacagaagaccataggtttgacacacaaacaccccataaaccata 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gaattctctatataatacagaagaccataggtttgacacacaaacaccccataaaccata 295
Query: 67 gcattttacaaccatttagacattttaatattttttcatcaaattttattcttacggata 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gcattttacaaccatttagacattttaatattttttcatcaaattttattcttacggata 235
Query: 127 aatatcttctctcataattactttgaactcttttttgcttgtattaaagatagattattt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 aatatcttctctcataattactttgaactcttttttgcttgtattaaagatagattattt 175
Query: 187 ccttatataatatatcctaataatagtttcccccatgcccactcctcccagttcttcccc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 ccttatataatatatcctaataatagtttcccccatgcccactcctcccagttcttcccc 115
Query: 247 atcacttcaggatctatttcctttctatctttcattgaaaaaaaaatttctatgacataa 306
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 114 atcacttcaggatctatttcctttctatctttcattgaaaaaaaaagttctatgacataa 55
Query: 307 aaaacaaacatgacaaaatgatttattaagatgatgcaaaactatcatattgaa 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 aaaacaaacataacaaaatgatttattaagatgatgcaaaactatcatattgaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_e18.g1 MSMg01no373_e18.g1 CHROMAT_FILE:
MSMg01no373_e18.g1 PHD_FILE: MSMg01no373_e18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:14 2005
(245 letters)
>mm_chr6_21271859_21272503
Length = 645
Score = 385 bits (199), Expect = e-111
Identities = 227/245 (92%), Gaps = 14/245 (5%)
Strand = Plus / Plus
Query: 1 ttcaccattccctatgatgtcagtgagtaactgcagggtcagttcaatgaaggtatagtt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ttcaccattccctatgatgtcagtgagtaactgcagggtcagttcaatgaaggtata--- 271
Query: 61 gctaaggtataaacaaatgaactattgcgttagtgatgaatccatctatatatgagagga 120
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 -----------aacaaatgaactattgcgttagtgatgaatccatctatatatgagagga 320
Query: 121 tgcaggtcatctcatgccactttactggtttacatgcagggaagcctccttgaacataat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcaggtcatctcatgccactttactggtttacatgcagggaagcctccttgaacataaa 380
Query: 181 tcttctatgctgctacgcctttgttctttctcccatcctcatggcacataaaacgaaagt 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttctatgctgctacatctttgttctttctcccatcctcatggcacataaaacgaaagt 440
Query: 241 gatcc 245
|||||
Sbjct: 441 gatcc 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
