Query= MSMg01no373_i18.b1 MSMg01no373_i18.b1 CHROMAT_FILE:
MSMg01no373_i18.b1 PHD_FILE: MSMg01no373_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:31 2005
(508 letters)
>mm_chr6_108259901_108260808
Length = 908
Score = 975 bits (504), Expect = 0.0
Identities = 507/508 (99%)
Strand = Plus / Plus
Query: 1 agaagagatgctaagacaaggtggaaggtgacagccaacacggacttccactgacttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaagagatgctaagacaaggtggaaggtgacagccaacacggacttccactgacttcct 260
Query: 61 ggccctgcatgcacctccctgcaggcatatatgtgtgctttcctttctcacctctaactg 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 ggccctgcatgcacctccctgcaggcatatatgtgtgcttgcctttctcacctctaactg 320
Query: 121 ttggcctggccccctgcttccctctcacccttgcctcttctccattcacacccacttggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggcctggccccctgcttccctctcacccttgcctcttctccattcacacccacttggt 380
Query: 181 agctgatcttagaggctaaatggatggctaacatggttagtttctcctatcagcatctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctgatcttagaggctaaatggatggctaacatggttagtttctcctatcagcatctgt 440
Query: 241 tctcccaggagctaaatctgtatatccatctctctgagtgacaactccccaggaacagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctcccaggagctaaatctgtatatccatctctctgagtgacaactccccaggaacagac 500
Query: 301 ctcagtgatagtgaaacctcgccgtgatgccctgtctcaaattggtagagtctccccgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcagtgatagtgaaacctcgccgtgatgccctgtctcaaattggtagagtctccccgtg 560
Query: 361 ccctcgcccgctcctgctctttcctatctgacctttgctctgatccttatagcgtctgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccctcgcccgctcctgctctttcctatctgacctttgctctgatccttatagcgtctgat 620
Query: 421 tcctcttcatccatcatccattgcattctagccatctgacgcctgttttctgacccagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcctcttcatccatcatccattgcattctagccatctgacgcctgttttctgacccagga 680
Query: 481 tggtgttgctgatcgactcacatccctg 508
||||||||||||||||||||||||||||
Sbjct: 681 tggtgttgctgatcgactcacatccctg 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space: 447204
Effective search space used: 447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_i18.g1 MSMg01no373_i18.g1 CHROMAT_FILE:
MSMg01no373_i18.g1 PHD_FILE: MSMg01no373_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:31 2005
(114 letters)
>mm_chr6_108425635_108426147
Length = 513
Score = 201 bits (104), Expect = 1e-56
Identities = 111/114 (97%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 1 aagaaatcatgtagtttgtgcagttagctaatcgagcagttagggcctagctctattttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aagaaatcatgtagtttgtgcagttagctaatcgagcagttagggcctagctctattttc 254
Query: 61 ctactctagaaacatggagatgggggggtcggggagtggcggnnagaggaagag 114
||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 253 ctactctagaaacatggagat-ggggggtcggggagtggcggggagaggaagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 114
Length of database: 513
Length adjustment: 8
Effective length of query: 106
Effective length of database: 505
Effective search space: 53530
Effective search space used: 53530
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
