Query= MSMg01no373_j05.b1 MSMg01no373_j05.b1 CHROMAT_FILE:
MSMg01no373_j05.b1 PHD_FILE: MSMg01no373_j05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:33 2005
(507 letters)
>mm_chr6_83471093_83471999
Length = 907
Score = 284 bits (147), Expect = 8e-81
Identities = 174/183 (95%)
Strand = Plus / Plus
Query: 325 agcactgtttgctcttaactgctgagccatctccccggctgagcatgcctactgcttgat 384
|||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||
Sbjct: 525 agcactgtttgctcttaactgctgagccatctccccggctgatcgtgcctactgtttgat 584
Query: 385 acagactttgtggaaaagccaaaggatgaatgctcaggaatgcagagagcatatgataga 444
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 585 acagactttgtgaaaaagctgaaggatgaatgctcaggaatgcagagagcatatgaaaga 644
Query: 445 atacagctaaacagcttttattacggtgctcaagtgcctattgaggaccacaggttctct 504
||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 645 atacatctaaacagcttttattacagtgctcaagtgcctattgaggaccacaggttctct 704
Query: 505 tga 507
|||
Sbjct: 705 tga 707
Score = 209 bits (108), Expect = 4e-58
Identities = 111/112 (99%)
Strand = Plus / Plus
Query: 229 taatattgagactacatccttctctgaggatgtcagagccactagagttggagctgtcta 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 taatattgagactacatccttctctgaggatgtcagagccactagagttggagctgtcta 271
Query: 289 atgtgagtgctgggactgaactcgggtcctctgcaaagcactgtttgctctt 340
||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 272 atgtgagtgctgggactgaactcgggtcctctgtaaagcactgtttgctctt 323
Score = 56.8 bits (29), Expect = 4e-12
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 201 ttcaatccagactgcacgttctgtgtttt 229
|||||||||||||||||||||||||||||
Sbjct: 1 ttcaatccagactgcacgttctgtgtttt 29
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_j05.g1 MSMg01no373_j05.g1 CHROMAT_FILE:
MSMg01no373_j05.g1 PHD_FILE: MSMg01no373_j05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:33 2005
(443 letters)
>mm_chr6_83622251_83623089
Length = 839
Score = 723 bits (374), Expect = 0.0
Identities = 386/392 (98%), Gaps = 4/392 (1%)
Strand = Plus / Minus
Query: 1 cacactggattggacttaccaaagcagggagcgaaggggactggtactgggtggaccaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 cacactggattggacttaccaaagcagggagcgaaggggactggtactgggtggaccaga 529
Query: 61 catcattcaacaaggagcaaagtaggaggtgagtgagtccgcagtgccctccttcttagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 catcattcaacaaggagcaaagtaggaggtgagtgagtccgcagtgccctccttcttagc 469
Query: 121 ctggcttgctccatggtgaatcctcatgaacacagggctctgctttgtccttgtccttgc 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 468 ctggcttgctccatggtgaatccccatgaacacagggctctgctttgtccttgtccttgc 409
Query: 181 acagtggcactactggaatggagtggagctaactgtttctgctcattggtacctggggcc 240
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 408 acagtggcactactggaatggagtggag----ctgtttctgctcattggtacctggggcc 353
Query: 241 agtcagggacctccgtgtcttatatggcttgatacccagcctttctgcctagctggggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 agtcagggacctccgtgtcttatatggcttgatacccagcctttctgcctagctggggtg 293
Query: 301 aggacctgacccaagtccaggcctatgcagtatagactcatgggagccttgagagatgca 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 aggatctgacccaagtccaggcctatgcagtatagactcatgggagccttgagagatgca 233
Query: 361 ggctaggggcacagcagggagcttagagttga 392
||||||||||||||||||||||||||||||||
Sbjct: 232 ggctaggggcacagcagggagcttagagttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 839
Length adjustment: 9
Effective length of query: 434
Effective length of database: 830
Effective search space: 360220
Effective search space used: 360220
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
