CCTATATCGAGAGGATCCGCGGAATTCAAAACAATTTCAAATAAGAAGAG
TCAATGAACCTAAGGGCCCATTTTAATTGGAAAATCATCAAAAAAAAAAA
GGCATCAAAAAAATCCAACATTTTTTAAGGTAAACCTTAAAAAGTTGAAC
TCCACTGAAGAGGGAAACTCAAAGGGAATGGTTGAGTTTCTAGGCAAATC
TCAACCACCAAAGTTAAATAAAGAGAGATCAACAACTTAAGGAGACCTGC
AACATTATTAAAACAGTAATACAAGTCTCCGAAATAAAGTGGCACAGATG
GATTCACAGCAGAATTACTACTAAGCTTTTAACCAACCACATTCAATATT
TCTCATATTATATTAAAAAGTAGAAATAAGAGAAGTTCTAAACTCCTATG
AAACCAGAATTACTCTAATTCTAAAGTCAGGTAGCTATAAAAGAAACCAA
AAAATTGCAAATCAATATCCATGATGAGAATAGGTGGGTGCAAAATTTTT
CAAGGAAAAAAACATGCTGAATGTAGACATCCATCTAAGTTATATATCAT
GATCATATGGAGTTTGGGTATACTTCAACAGATGTAATCCCATAAGTCTA
CAAAATCATATAAATGGATTTAACAGCGAAAGTCACATAATCATCATAAT
AGATGCTGAAAAGACCTTTGACAGAAGCCAACATGACATCATGACAAAAT
TTCTA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXATTAGGAACTAGTAGAAAATATTAATTATATGGCTATACAGAT
GACACTGTTCAAAAACTGTGGAACAGAAATAAAAAGTCATGAATGTGTGA
AAGAGATGAGTAAGAAAAGGGAGCATACAGTAGAGGGAATGGTAGGGATA
AGAAATGGTTGGAAATGGAGCCACCATAGTGCAGTACATACATGCACAAT
ATCATCAAAGAACAAATTTAATTAATATGCATTTACATATAATTTTACAT
ATAGCATCCATATTTTATAGAAAATATGACATTTGTTCAAGTCTTGTTTA
CTCTCTGAAACATGGTAAACTCCAGTTAAATGAGTTTTCTGGTAAATGTT
GCATTTTAATTTTCCTTACAGCTACATAAAATATTTCATGCTTATACATA
ATATTTTTATTTTACATTCAATTGGTGGTGGATAACTAAGATGATTTTAT
CGCTGGCTATTGTGAATAAAATGGCAATGAACATGAATGTACAAGTATCT
TTTTGAACACTGACTTAGAGAATATATGCAGCTGGATCATATAGCAGTTT
TATTTTCAGAATTTTTGTTTTAATTTCCATGATTGAAGTTTAATTTTCCA
CTAGCAGTGAAGAAAAGTTTGCCATTTTCCTCATTTTATCCCCCCGTTGG
TTATTTGTTTTTGTCATCCN

Query= MSMg01no373_l10.g1 MSMg01no373_l10.g1 CHROMAT_FILE:
MSMg01no373_l10.g1 PHD_FILE: MSMg01no373_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:44 2005
         (561 letters)



>mm_chr6_62433316_62434276
          Length = 961

 Score = 1019 bits (527), Expect = 0.0
 Identities = 552/561 (98%), Gaps = 2/561 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   attaggaactagtagaaaatattaattatatggctatacagatgacactgttcaaaaact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 attaggaactagtagaaaatattaattatatggctatacagatgacactgttcaaaacct 260

                                                                       
Query: 61  gtggaacagaaataaaaagtcatgaatgtgtgaaagagatgagtaagaaaagggagcata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggaacagaaataaaaagtcatgaatgtgtgaaagagatgagtaagaaaagggagcata 320

                                                                       
Query: 121 cagtagagggaatggtagggataagaaatggttggaaatggagccaccatagtgcagtac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtagagggaatggtagggataagaaatggttggaaatggagccaccatagtgcagtac 380

                                                                       
Query: 181 atacatgcacaatatcatcaaagaacaaatttaattaatatgcatttacatataatttta 240
           ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 atacatgtacaatatcatcaaagaataaatttaattaatatgcatttacatataatttta 440

                                                                       
Query: 241 catatagcatccatattttatagaaaatatgacatttgttcaagtcttgtttactctctg 300
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catacagcatccatattttatagaaaatatgacatttgttcaagtcttgtttactctctg 500

                                                                       
Query: 301 aaacatggtaaactccagttaaatgagttttctggtaaatgttgcattttaattttcctt 360
           ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaac--ggtaaactccagttaaatgagttttctggtaaatgttgcattttaattttcctt 558

                                                                       
Query: 361 acagctacataaaatatttcatgcttatacataatatttttattttacattcaattggtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 acagctacataaaatatttcatgcttatacataatatttttattttacattcaattggtg 618

                                                                       
Query: 421 gtggataactaagatgattttatcgctggctattgtgaataaaatggcaatgaacatgaa 480
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 619 gtggataactaagatgattttatcactggctattgtgaataaaatggcaatgaacatgaa 678

                                                                       
Query: 481 tgtacaagtatctttttgaacactgacttagagaatatatgcagctggatcatatagcag 540
           |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 679 tgtacaagtatctttttgaacactgacttagagaatatgtgcagatggatcatatagcag 738

                                
Query: 541 ttttattttcagaatttttgt 561
           |||||||||||||||||||||
Sbjct: 739 ttttattttcagaatttttgt 759


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space:   524001
Effective search space used:   524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)