Query= MSMg01no373_n22.b1 MSMg01no373_n22.b1 CHROMAT_FILE:
MSMg01no373_n22.b1 PHD_FILE: MSMg01no373_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:55 2005
(548 letters)
>mm_chr6_99045777_99046724
Length = 948
Score = 1006 bits (520), Expect = 0.0
Identities = 542/552 (98%), Gaps = 6/552 (1%)
Strand = Plus / Minus
Query: 2 ggaattcttgtggtttccctgacattgagtgagaggccaggcagctactgtggagacgaa 61
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ggaattcttgtggtttccttgtcattgagtgagaggccaggcagctactgtggagacgaa 572
Query: 62 cctccccgaggttgcctacaaagggcagtgttccagtgtgttctctcctcgagtgtgctt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 cctccccgaggttgcctacaaagggcagtgttccagtgtgttctctcctcgagtgtgctt 512
Query: 122 cagcgctcagcacttcctgtttattcaaacatctcttttaccactcggcaaacccccgct 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 cagcgctcagcacttcctgtttattcaaacatctcttttaccactcggcaaacccccgct 452
Query: 182 tcacagaaacagccagagcccatccacagcaagacggaactgcaaaggcacacggtacag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tcacagaaacagccagagcccatccacagcaagacggaactgcaaaggcacacggtacag 392
Query: 242 attcactccctccaactcttcgttttctctgtaagtgtcctggtgggggcaggggaaaga 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 attcactccctccaactcttcgttttctctgtaagtgtcctggtgggggcaggggaaaga 332
Query: 302 acattttcaatgggctaaataaacttttaagctcggatctttgcttgggcagacaagctg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 acattttcaatgggctaaataaacttttaagctcggatctttgcttgggcagacaagctg 272
Query: 362 taaaggggaaaacgagatgcttcaacttgtttactgtgtttccttcccgagctcctctct 421
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 taaaggggaaaatgagatgcttcaacttgtttactgtgtttccttcccgagctcctctct 212
Query: 422 ccatctaggcttttttttttt-----cgtcatctttttcttccttttttttttttcccca 476
||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||
Sbjct: 211 ccatctaggctttttttttttttttccgtcatctttttcttcc-ttttttttttccccca 153
Query: 477 tagagatctgagaggagggaatcctgctaactccttgttaattctctcttgatttcacat 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 tagagatctgagaggagggaatcctgctaactccttgttaattctctcttgatttcacat 93
Query: 537 gtggccttggct 548
||||||||||||
Sbjct: 92 gtggccttggct 81
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_n22.g1 MSMg01no373_n22.g1 CHROMAT_FILE:
MSMg01no373_n22.g1 PHD_FILE: MSMg01no373_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:55 2005
(583 letters)
>mm_chr6_98867445_98868425
Length = 981
Score = 1038 bits (537), Expect = 0.0
Identities = 571/583 (97%), Gaps = 2/583 (0%)
Strand = Plus / Plus
Query: 1 aagatagcacttagcactctatctcctaggaggtggggaataactgtcatggcctcctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagatagcacttagcactctatctcctaggaggtggggaataactgtcatggcctcctta 260
Query: 61 gccgtacttttctttgaaaggtgctaccttgacccttttactacgattgtttctgtatac 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 gccgtacttttctttgaaaggtgctaccttgacccttttactaggattgtttctgtatac 320
Query: 121 actgtgagtctgagcactcagaggctgcctctcttccctccgacctccgtgaatgtgaat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 actgtgagtctgagcactcagaggctgcctctcttccctccgacctccgtgactgtgaat 380
Query: 181 gaagaatggtgagctcaggctgccgagctctaccctgggcttttgtgatggcaacgttaa 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 gaagaatggtgagctcaggctgccgagctctatcctgggcttttgtgatggcaacgttaa 440
Query: 241 cttgggttcatggaacacggtaccgcaaatggttacctttttagtataggatgtaggaag 300
|||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | |
Sbjct: 441 cttgggttcatggaacacggtaccacaagtggttacctttttagtataggatgtagcagg 500
Query: 301 gcagtattgagaatacattcagcagggtagtctgggcaataattggacagtaagtgacac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcagtattgagaatacattcagcagggtagtctgggcaataattggacagtaagtgacac 560
Query: 361 taccattcagttggtgcttctgccagatatggagactgtgctaaatgctttggcccagac 420
|||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 561 taccattcagttggtgcttctgccagatatggagactg--ctaaatgctttggtccagac 618
Query: 421 agacttgggcctacaggggcataagggaaaggaagaagaaaggcattaaggcctgtgtcc 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 agacctgggcctacaggggcataagggaaaggaagaagaaaggcattaaggcctgtgtcc 678
Query: 481 catattatttttagttgacatgtgtgtttgagagcgtaagaacatattgcaaaaagaaca 540
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 catatcatttttagttgacatgtgtgtttgagagcgtaagaacatattgcaaaaagaaca 738
Query: 541 gcctctggagagctttgtccaagttacgtgactgcttcctctc 583
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gcctctggagagctttgtccaagttacgtgactgcttcctctc 781
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 981
Length adjustment: 10
Effective length of query: 573
Effective length of database: 971
Effective search space: 556383
Effective search space used: 556383
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
