Query= MSMg01no374_c08.b1 MSMg01no374_c08.b1 CHROMAT_FILE:
MSMg01no374_c08.b1 PHD_FILE: MSMg01no374_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:17 2005
(574 letters)
>mm_chr6_52913724_52914697
Length = 974
Score = 1050 bits (543), Expect = 0.0
Identities = 564/571 (98%)
Strand = Plus / Minus
Query: 4 ggaattccttttagagtctattatcttctgtcttgtcgttgtcctctttattgttagtag 63
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ggaatttcttttagaggctattatcttctgtcttgtcgttgtcctctttattgttagtag 554
Query: 64 catcttgggctatctttttggaatataagcctgagaacatagtggtgctgcgctgagctg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 catcttgggctatctttttggaatataagcctgagaacatagtggtgctgcgctgagctg 494
Query: 124 ggagcgcatctcacttggagggcttggcaaaaagccaaccgcgcagccttctctgcacgc 183
||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||
Sbjct: 493 ggagcgcatctcacttggaggacttggcaaaaagccagccgtgcagccttctctgcacgt 434
Query: 184 agcctgtttgtgagcagtgtgcccttctgtgctgcatctcctgcttttttgtcaaccaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 agcctgtttgtgagcagtgtgcccttctgtgctgcatctcctgcttttttgtcaaccaca 374
Query: 244 catatttttgtcatctccttctggtccttttatcaactgtaagtgctgtccctactggaa 303
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 373 catatttttgtcatctccttctggtccttttatcaactgttagtgctgtccctactggaa 314
Query: 304 ggtctgtccatgggtctgtgggtggcacacggtgagtggaaggccaccctgacatcttgg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ggtctgtccatgggtctgtgggtggcacacggtgagtggaaggccaccctgacatcttgg 254
Query: 364 cagattgagagctgggttaaaaatacttttatgaagagtattaacttttgtatattaata 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cagattgagagctgggttaaaaatacttttatgaagagtattaacttttgtatattaata 194
Query: 424 tatttactttattttttaaagcccctcccaatagttgagtgagaaagaaaagcaagagtt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tatttactttattttttaaagcccctcccaatagttgagtgagaaagaaaagcaagagtt 134
Query: 484 cagttgtaaaagtttgtgaggaggattaaagatttctgaggtgtggtcagggcaggattt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 cagttgtaaaagtttgtgaggaggattaaagatttctgaggtgtggtcagggcaggattt 74
Query: 544 tgagaagaatttgactgtagccataaagggt 574
|||||||||||||||||||||||||||||||
Sbjct: 73 tgagaagaatttgactgtagccataaagggt 43
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_c08.g1 MSMg01no374_c08.g1 CHROMAT_FILE:
MSMg01no374_c08.g1 PHD_FILE: MSMg01no374_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:17 2005
(306 letters)
>mm_chr6_52725552_52726257
Length = 706
Score = 513 bits (265), Expect = e-150
Identities = 277/281 (98%), Gaps = 2/281 (0%)
Strand = Plus / Plus
Query: 1 tctcaggacagctctgctgctctacagccacagggcagctcagcatcttgctgggaggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcaggacagctctgctgctctacagccacagggcagctcagcatcttgctgggaggag 260
Query: 61 tggctaggggtttctctgtgctatgtcacctggcattctgaatcagtaagggacacagtt 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggctaggggtgtctctgtgctatgtcacctggcattctgaatcagtaagggacacagtt 320
Query: 121 ccctcacagccactagagccatccgctactcagttcctgcagcacagggtcactaagttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccctcacagccactagagccatccgctactcagttcctgcagcacagggtcactaagttt 380
Query: 181 gctcttggccttaacaggagagagcattcaaagcccatgtgaacccaggcttcgatagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctcttggccttaacaggagagagcattcaaagcccatgtgaacccaggcttcgatagag 440
Query: 241 gaagaggttgctagagactcttcaacgaat-aagggtgggg 280
|||||||||||||||||||||||||| ||| ||||| ||||
Sbjct: 441 gaagaggttgctagagactcttcaac-aattaagggagggg 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 706
Length adjustment: 9
Effective length of query: 297
Effective length of database: 697
Effective search space: 207009
Effective search space used: 207009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
