ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTCTAGTCTTTGACATTCTGCGACCCTATGGTTGTGGAGACGGGAAG
CTACAGAATGATGGAATTATGTAGACCAGAGAGGCAGGCACAGACTCTCA
ATGGGCACATTTCTCCCTTTTGGTCCCTCCCTCGGTAAGACTGTTGAGCG
TCTTGTGTGATAGTTTGATTGCTGCGTGAGCATCCTCAGCAGTGAGTTTC
TGGTGATTTTCATCACGGCTCCTCCAGGCTTGTTAAGGCAGTTCTGTGGG
ATCAGCTGTGTAAACTAATGGCACCCTGCATTACCTGCAATTAGTGGGCT
TGGAGTGAGTTTTGAAGGGCATTGCATAGGATCAAAATAGGAGCTTGTAA
AATTGTCTTAGCTGACACAACTTTTCCCTCAGTGCCTTCTTTTTATTCTG
TGCCCCTGGCTGCTGACCTACCTGCCTTTCTGTGTGGGCAGATAGAAGCA
CCCTGTTCCAGCACTTTTCCCTCACGGGAGCTTTTGGCTGCTGAAATCTG
TGAACCTTGATACACTTCAGTTCTAAACTTGACCCAAGCACGAATGAACG
TCTGGATAACCGGATAGCNGAGATCCTGTGAACCCTTATATAGTGGATGT
CGACCCTTCTCCCGTAATGACCACTCCCCCACGTCTGTTGGGACCGTATT
ACCCTCCCGCCTTTGTTTTCCCTTTTTACATAACATCTATATATCCTCCT
CAGTACTGTAATCTAGACCCTTTTGTTTCCTTTAATCAAAAACCN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXTCTGCACTTTGGCAGATATTGGTTTCTGCATGATTCCTTGCTGCA
GTAAGAAATTCCTCAGAGTGAACCACTAATCTGTGGAGATAGATATGAGA
TCAAGAAGACCATTTGATAAGGTGAATTTAGCAAAATAATAATAGTATAT
TCCAGACTGGGGCCTATGATCTCCTCAGCCATGAGGCTCTTTGACCAAGC
TCACAGAAGAAAAAAAAAAAAACATGCATTCTTTCCCATGGAGCAAGTAA
CAAATCCAATTAACAAGTGGCTGGTATCCAATGTAACTCTCCACTCAGGG
CACCTCTGTACTAGTGAGCAAAAGTGCTGGCTATCCCATGCCCCTATTTT
TAAAGAATTAGTGAGAATAATTTGATATCACAAAATATAAAAACTATACA
ATTTTTACAAGGNGAATGTAATATAGTTTGAAGAGTTATAAATTAGGACT
TTCAAAATCATCCTGGGATGCTATCTCCCAGAATGAGACCTACCTCAGTA
ATTTTGGACACTTAGTATGCAATCAATCCGTAACTGATTTTCGGCCATGG
AGTCCACACATTAAAAGCAATTGGCTATAGTAAATTTCTAGTGCTGTGGA
TGGGCCTTCTTTCTTTGGTTATAATTTATTAATAGAATTTTTTTCGGGGT
CAAATCTGGTCAACCTATCATAACCAAGNGGCTCCCCGATAATCTCTCTA
AATATCCCGTGTTGTCGCCCGGATTTGTGTTN

Query= MSMg01no374_e06.b1 MSMg01no374_e06.b1 CHROMAT_FILE:
MSMg01no374_e06.b1 PHD_FILE: MSMg01no374_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:27 2005
         (439 letters)



>mm_chr6_22304015_22304852
          Length = 838

 Score =  779 bits (403), Expect = 0.0
 Identities = 427/435 (98%), Gaps = 1/435 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctctagtctttgacattctgcgaccctatggttgtggagacgggaagctacaga 64
           ||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 638 gaattcctctagtcggtgacattctgcgaccctatggttgtggagacgcgaagctacaga 579

                                                                       
Query: 65  atgatggaattatgtagaccagagaggcaggcacagactctcaatgggcacatttctccc 124
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 578 atgatggaattatgtagaccagagaggcaggcacagactctcaat-ggcacatttctccc 520

                                                                       
Query: 125 ttttggtccctccctcggtaagactgttgagcgtcttgtgtgatagtttgattgctgcgt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ttttggtccctccctcggtaagactgttgagcgtcttgtgtgatagtttgattgctgcgt 460

                                                                       
Query: 185 gagcatcctcagcagtgagtttctggtgattttcatcacggctcctccaggcttgttaag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gagcatcctcagcagtgagtttctggtgattttcatcacggctcctccaggcttgttaag 400

                                                                       
Query: 245 gcagttctgtgggatcagctgtgtaaactaatggcaccctgcattacctgcaattagtgg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gcagttctgtgggatcagctgtgtaaactaatggcaccctgcattacctgcaattagtgg 340

                                                                       
Query: 305 gcttggagtgagttttgaagggcattgcataggatcaaaataggagcttgtaaaattgtc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gcttggagtgagttttgaagggcattgcataggatcaaaataggagcttgtaaaattgtc 280

                                                                       
Query: 365 ttagctgacacaacttttccctcagtgccttctttttattctgtgcccctggctgctgac 424
           |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 279 ttagctgatacaacttctccctcagtgccttctttttattctgtgcccctggctgctgag 220

                          
Query: 425 ctacctgcctttctg 439
           || ||||||||||||
Sbjct: 219 ctgcctgcctttctg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 838
Length adjustment: 9
Effective length of query: 430
Effective length of database: 829
Effective search space:   356470
Effective search space used:   356470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)