Query= MSMg01no374_l15.b1 MSMg01no374_l15.b1 CHROMAT_FILE:
MSMg01no374_l15.b1 PHD_FILE: MSMg01no374_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:03 2005
(460 letters)
>mm_chr6_47041102_47041961
Length = 860
Score = 845 bits (437), Expect = 0.0
Identities = 449/453 (99%), Gaps = 1/453 (0%)
Strand = Plus / Minus
Query: 5 gaattcttttgtatactttagagtcatcctttaaaagctttatggattcatgtcagcttt 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gaattcttttgtatattttagagtcatcctttaaaagctttatggattcatgtcagcttt 501
Query: 65 ggaggaaggaacaaaccaggcttaaatgtgttatcctgaaaccacatcataaaccaactg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ggaggaaggaacaaaccaggcttaaatgtgttatcctgaaaccacatcataaaccaactg 441
Query: 125 tttgactgaggccccagagccatgtaaatcatttaaggttccaagtagcagatttactgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tttgactgaggccccagagccatgtaaatcatttaaggttccaagtagcagatttactgc 381
Query: 185 tgtcatttcattgtttcagattggtttaagaaaatgccaaatcgggatacattattatat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtcatttcattgtttcagattggtttaagaaaatgccaaatcgggatacattattatat 321
Query: 245 cttaagtaacatctccatcccttctgaaaaatacataaaagaggcctaatttaataatgc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cttaagtaacatctccatcccttctgaaaaatacataaaagaggcctaatttaataatgc 261
Query: 305 ccaaataacacaatttccttcattaaattctattgatttagaatgcttggttcaaatctc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 260 ccaaataacacaatttccttcattaaattctattgatttagaatgcttggttcaaatatc 201
Query: 365 tctcctctctctctctctctctctctctctctctctctctctctctctctctctctctct 424
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tcttctctctctctctctctctctctctctctctctctctctctctctctctctctctct 141
Query: 425 ctctctctctctctctctctctctctctccctg 457
||| |||||||||||||||||||||||||||||
Sbjct: 140 ctc-ctctctctctctctctctctctctccctg 109
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 177
Number of extensions: 47
Number of successful extensions: 47
Number of sequences better than 10.0: 1
Number of HSP's gapped: 41
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_l15.g1 MSMg01no374_l15.g1 CHROMAT_FILE:
MSMg01no374_l15.g1 PHD_FILE: MSMg01no374_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:03 2005
(459 letters)
>mm_chr6_46865282_46866140
Length = 859
Score = 824 bits (426), Expect = 0.0
Identities = 452/462 (97%), Gaps = 3/462 (0%)
Strand = Plus / Plus
Query: 1 cataattctgccttaggaaatattagttacttctcttccaaacaagaaacatttcagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cataattctgccttaggaaatattagttacttctcttccaaacaagaaacatttcagaca 260
Query: 61 ttgaaattatatttctggtaaaagaaggaaagttctgggaacaacttaactagaactttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgaaattatatttctggtaaaagaaggaaagttctgggaacaacttaactagaactttt 320
Query: 121 actaagagaactctacaactcctcaaattcaaatgaagaaatgcctttactgggtgttat 180
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 321 actaagagaactctacaactcctcaaattcaaatgaaggaatgcctctactgggtgttat 380
Query: 181 cctgtccaagacccagatgtagagaatgttgcttttaaacctgtacccttgaaaatataa 240
|||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 381 cctgtccatgacccagatgtagagaatgttgcttttaaacctgtacccttaaaaatatga 440
Query: 241 ttccaaatgttctgcactatacttcttcaatggtgaagtcattcatacacatcagctctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttccaaatgttctgcactatacttcttcaatggtgaagtcattcatacacatcagctctt 500
Query: 301 aacatgtaacaaatgatggggttgaagaggtgactcagcagtaaacagtgtaaggcaggc 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 aacatgtaacaaatgatggggttgaagaagtgactcagcagtaaacagtgtaaggcaggc 560
Query: 361 atccctgtccagcagctcacagctacctaactatagctccagaggatatgaatccctcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atccctgtccagcagctcacagctacctaactatagctccagaggatatgaatccctcat 620
Query: 421 ct---ggcctggaatgcatgcaagtacacacacatacacact 459
|| ||||| |||||||||||||||||||||||||||||||
Sbjct: 621 cttctggcctcgaatgcatgcaagtacacacacatacacact 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
