Query= MSMg01no375_j15.b1 MSMg01no375_j15.b1 CHROMAT_FILE:
MSMg01no375_j15.b1 PHD_FILE: MSMg01no375_j15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:14 2005
(505 letters)
>mm_chr6_46640132_46641036
Length = 905
Score = 924 bits (478), Expect = 0.0
Identities = 498/505 (98%)
Strand = Plus / Minus
Query: 1 ggccttgtcatgctgtctttgatataatgtactgttcctttgtaatgccttcccacccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ggccttgtcatgctgtctttgatataatgtactgttcctttgtaatgccttcccacccaa 452
Query: 61 aaggtacatcatggctctcatggctgcactgccctctctccaaacaaagttcatttcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aaggtacatcatggctctcatggctgcactgccctctctccaaacaaagttcatttcaga 392
Query: 121 agagtaatttcacatcagctcctttcccaaactaattgctgcccaactggttttcaacaa 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 391 agagtaatttcacatcagctcctttcccatactaattgctgcccaactggttttcaacaa 332
Query: 181 cttgttttagcataatttcattgtcttatattctgattctttactatatcccatatgcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cttgttttagcataatttcattgtcttatattctgattctttactatatcccatatgcat 272
Query: 241 tttctttcacataaccccttgaaatatatgttttgtgtttggggtctgcacctgtaaaat 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 271 tttctttcacataaccccttgaaatatatgttttgtgttttgggtctgcacctgtaaaat 212
Query: 301 gttctattttttcccttttttattgggtatttatttcatttacatttccaatgctatccc 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gttctatttttccccttttttattgggtatttatttcatttacatttccaatgctatccc 152
Query: 361 aaaagtcccccacacactcccccatacactcccctacccacccactcccacttcttggct 420
|||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 151 aaaagtcccctacacactcccccacacactcccctacccacccactcccacttcttggct 92
Query: 421 ctggcgttcctctgtactgaggcatataaagtttgcacgaccaatgggcctctccttcca 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 ctggcgtttctctgtactgaggcatataaagtttgcacgaccaatgggcctctccttcca 32
Query: 481 ctgatggncaactaggccatcttct 505
||||||| |||||||||||||||||
Sbjct: 31 ctgatggccaactaggccatcttct 7
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_j15.g1 MSMg01no375_j15.g1 CHROMAT_FILE:
MSMg01no375_j15.g1 PHD_FILE: MSMg01no375_j15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:15 2005
(495 letters)
>mm_chr6_46418802_46419699
Length = 898
Score = 926 bits (479), Expect = 0.0
Identities = 492/498 (98%), Gaps = 3/498 (0%)
Strand = Plus / Plus
Query: 1 gggaaaaagaagaagaanaagtgaaaaaagtaaaggaaagataaagggagagagaaaaat 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gggaaaaagaagaagaaaaagtgaaaaaagtaaaggaaagataaagggagagagaaaaat 260
Query: 61 cacctaatacatttgtacttctgttataattaaggtgataacaccagttcgagtctcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 cacctaatacatttgtacttctgttataattaaggtgataacaccagttagagtctcttg 320
Query: 121 aatatgttcaccctgctatcttaaggattttctttccctaaaaagttatttctagctaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatatgttcaccctgctatcttaaggattttctttccctaaaaagttatttctagctaat 380
Query: 181 tatcctcactaaggaatgtaatctgtcagcctgtcttgctaatgttcctcacaatggagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatcctcactaaggaatgtaatctgtcagcctgtcttgctaatgttcctcacaatggagg 440
Query: 241 ctgctccagtgaatagaaactgacttaatggagaaaattagatacttagaggagttgatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgctccagtgaatagaaactgacttaatggagaaaattagatacttagaggagttgatt 500
Query: 301 atttggggattttcttccaaggtgaaaaatgtcatctatcccatcaagaaatttttaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttggggattttcttccaaggtgaaaaatgtcatctatcccatcaagaaatttttaaca 560
Query: 361 gggcctgctgg---gagaagaagggctccaatctctcacagggaagccactgagatatac 417
||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 gggcctgctggagggagaagaagggctccaatctctcacagggaagccactgagatacac 620
Query: 418 actattgttacctttcttatgtgcctcatcttcccatgcttgggaatgacagggattaag 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actattgttacctttcttatgtgcctcatcttcccatgcttgggaatgacagggattaag 680
Query: 478 ggtcaaggtgagtaccca 495
||||||||||||||||||
Sbjct: 681 ggtcaaggtgagtaccca 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 898
Length adjustment: 10
Effective length of query: 485
Effective length of database: 888
Effective search space: 430680
Effective search space used: 430680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
