Query= MSMg01no376_p14.b1 MSMg01no376_p14.b1 CHROMAT_FILE:
MSMg01no376_p14.b1 PHD_FILE: MSMg01no376_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:00 2005
(583 letters)
>mm_chr6_5379463_5380445
Length = 983
Score = 1067 bits (552), Expect = 0.0
Identities = 573/580 (98%)
Strand = Plus / Plus
Query: 4 ggaattcttgatgtctgtgagagatgtgagtcatgtgcccacaccaagtgacaagatctc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttgatgtctgtgagagatgtgagtcatgtgcccacaccaagtgacaagatctc 263
Query: 64 tgtttcctctgcaggtgatccaggcttgccactcttgcccgaaagccattgaagttgtgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtttcctctgcaggtgatccaggcttgccactcttgcccgaaagccattgaagttgtgg 323
Query: 124 tcaatgcctatgagcacattcgatggaacataaagtggagacgagccattcctgatgatg 183
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcaatgcctatgaacacattcgatggaacataaagtggagacgagccattcctgatgatg 383
Query: 184 acttggaggtaaatgattcactttctgtggtcttcactagggagtgctgccagatctctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 384 acttggaggtaaatgattcactttctgtggtcttcactagggagtgctgccagatgtctg 443
Query: 244 gataagccttcagcattcttgtttaacacattggttttgagagtgctttcaaagtttttt 303
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 444 gataagccctcagcattcttgtttaacacattggttttgagagtgctttcaaagtttatt 503
Query: 304 ttttttttcaaatgtaatgaaacaaaggattataaaatgcaagtatgagaatgtaaaact 363
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 504 atttttttcaaatgtaatgaaacaaaggattataaaatgcaagtttgagaatgtaaaact 563
Query: 364 ttatgcttgtatatctgtcaaatatgtgatataggaagtcttgggaatttctctgagaga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttatgcttgtatatctgtcaaatatgtgatataggaagtcttgggaatttctctgagaga 623
Query: 424 agtttgagtaaatatataaaggtggcagttttattttcctctaatttaaatgagttaagg 483
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agtttgagtaaatatatagaggtggcagttttattttcctctaatttaaatgagttaagg 683
Query: 484 gatactatccaggactgctgactcagcaatttttccagcatgccacagtgttttatatca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gatactatccaggactgctgactcagcaatttttccagcatgccacagtgttttatatca 743
Query: 544 ctagtgagtttactttcaactatatctaggtgcttatgac 583
||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ctagtgagtttactttcaactatatctaggtgcttatgac 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_p14.g1 MSMg01no376_p14.g1 CHROMAT_FILE:
MSMg01no376_p14.g1 PHD_FILE: MSMg01no376_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:00 2005
(417 letters)
>mm_chr6_5578690_5579504
Length = 815
Score = 455 bits (235), Expect = e-132
Identities = 318/373 (85%), Gaps = 46/373 (12%)
Strand = Plus / Minus
Query: 4 caaattaaaaagcctctgaataccaaaacagagcagagagagcctccacggtgggaaagc 63
||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||
Sbjct: 370 caaattaaaaagcctctgaataccaaa--agagcagagagagcctccatgatgggaaagc 313
Query: 64 atttccaatgtgtacatt-gaacaaggatgtatcaaggatatgcagagtatgcaaggaac 122
||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 312 atttccaatgtgtgcattggaa-aaggatgtatcaaggatatgcagagtatgcaaggaac 254
Query: 123 tgtcaaaattcaatggcagcagacaattaacca--------------------------- 155
||||||||||||||||||||||||| |||||||
Sbjct: 253 tgtcaaaattcaatggcagcagacagttaaccagctgtgtgtgtgtgtgtgtgtgtgtgt 194
Query: 156 --------------gt-tgtgtgtgtatgtgtttgtcagtatgcatgtttgcatgcagat 200
|| ||||||||| |||||||| | || |||||||||||||||||||
Sbjct: 193 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgccggtgtgcatgtttgcatgcagat 134
Query: 201 acaggcttgccatgatacatgaggaagtcagaggaaacttgggtatcagcccttgtcata 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 acaggcttgccatgatacatgaggaagtcagaggaaacttgggtatcagcccttgtcata 74
Query: 261 gttactgttcaatcgctgtgaagagaaatcataaccacagcagctcctacaaagtgaagc 320
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gttactgttcagtcgctgtgaagagaaatcataaccacagcagctcctacaaagtgaagc 14
Query: 321 aattagtggaagc 333
|||||||||||||
Sbjct: 13 aattagtggaagc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 815
Length adjustment: 9
Effective length of query: 408
Effective length of database: 806
Effective search space: 328848
Effective search space used: 328848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
