Query= MSMg01no379_b09.b1 MSMg01no379_b09.b1 CHROMAT_FILE:
MSMg01no379_b09.b1 PHD_FILE: MSMg01no379_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:45 2005
(529 letters)
>mm_chr6_117435634_117436562
Length = 929
Score = 864 bits (447), Expect = 0.0
Identities = 507/527 (96%), Gaps = 1/527 (0%)
Strand = Plus / Minus
Query: 4 ggaattcatgggattactcataatgttaaactgaatgagccagactcaggaaaacaaata 63
||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 575 ggaattcatgggacaaatcataatgttaagctgaatgagccagactcaggaaaacaaata 516
Query: 64 acacatgttttcgcttatatgtaaaatctggattaaagaagcaaacagatccagttaaag 123
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 acacatgtttttgcttatatgtaaaatctggattaaagaagcaaacagatccagttaaag 456
Query: 124 ggagagtatttggagagagtgaagaggtcaggggagggagatgagagagggtgatatgac 183
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 455 ggagagtatttggagagagtgaagaggtcaggggagggagatgagagagggcgatatgat 396
Query: 184 caaaggacatgatagaaatgtttgaaaaggtctcagtgaaatccattattttgctcaagt 243
|||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 395 caaaggacatgatagaaatgtttgaaaacatctcagtgaagtccattattttgctcaagt 336
Query: 244 aacatatacaaagaaaaac-aaaaaaaggaaaaattatttttaaataatattcaaaataa 302
||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 335 aacatatacaaagaaaaacaaaaaaaaggaaaaattacatttaaataatattcaaaataa 276
Query: 303 accatggagactgttgacacggaaggccttgcactcaaacccaagagtccccagtggttt 362
||||| ||||||||||||| |||||| ||| ||||||||||||||||||| |||||||||
Sbjct: 275 accattgagactgttgacatggaagggcttacactcaaacccaagagtccgcagtggttt 216
Query: 363 gcaaatgtgctatggggaagcagctgtctctcacctgcttcagcctcatttgggctccac 422
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gcaaatgtgctgtggggaagcagctgtctctcacctgcttcagcctcatttgggctccac 156
Query: 423 gcatcgtccaaaggtctttggcaagttgttcagtgttcctgaactccagaattctacttc 482
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gcatcatccaaaggtctttggcaagttgttcagtgttcctgaactccagaattctacttc 96
Query: 483 tcctgactgtgaaagcatcaagctccatcgctctctttatgcctgct 529
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tcctgactgtgaaagcatcaagctccatcgctctctttatgcctgct 49
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_b09.g1 MSMg01no379_b09.g1 CHROMAT_FILE:
MSMg01no379_b09.g1 PHD_FILE: MSMg01no379_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:45 2005
(466 letters)
>mm_chr6_117226526_117227391
Length = 866
Score = 841 bits (435), Expect = 0.0
Identities = 458/466 (98%), Gaps = 1/466 (0%)
Strand = Plus / Plus
Query: 1 ttcctcctgtttcccaatcctttgataaataagtataaaggcaaatagacgatctcaaga 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttcctcctgtttcccaatcctctgataaataagtataaaggcaaatagacgatctcaaga 261
Query: 61 gggaaaacatctcggtgaccaaagtgtctgacagaacatgaaagaggaaagctttatttt 120
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gggaaaacatctctgtgaccaaagtgtctgacagaacatgaaagaggaaagctttattt- 320
Query: 121 gtgccatggttccagaaggctctgtctgtggctacttggtctcaggtgcttgaccaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgccatggttccagaaggctctgtctgtggctacttggtctcaggtgcttgaccaagaa 380
Query: 181 atcagggcagtagtggagcatgacaggggtgattttcacctcagggcagacagcaagcac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcagggcagtagtggagcatgacaggggtgattttcacctcagggcagacagcaagcag 440
Query: 241 agagaaggggacacaggatgaggccagggcagagctagctcccaagctcaccccagtgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agagaaggggacacaggatgaggccagggcagagctagctcccaagctcaccccagtgac 500
Query: 301 ctacttcctttacttctacctttcagtaactctcagtgatgtcgtcatgtcatgagttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctacttcctttacttctacctttcagtaactctcagtgatgtcgtcatgtcatgagttca 560
Query: 361 ccgagggttagtttattgcttaagtctgagccctcataatgccgttgtctgtaggcattc 420
|||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||
Sbjct: 561 ccgagggttagtttattgcttaagtctgagccctcacaataccattgtctgtaggcattc 620
Query: 421 ggngtccttgacatggtcatgctgaggtcaacagtacacattcact 466
|| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggggtccttgacatggtcatgctgaggtcaacagtacacattcact 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
