Query= MSMg01no379_d07.b1 MSMg01no379_d07.b1 CHROMAT_FILE:
MSMg01no379_d07.b1 PHD_FILE: MSMg01no379_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:54 2005
(493 letters)
>mm_chr6_47348910_47349802
Length = 893
Score = 659 bits (341), Expect = 0.0
Identities = 357/363 (98%), Gaps = 3/363 (0%)
Strand = Plus / Minus
Query: 9 tctgtcattcc--ataactgtggctatttatagtatgcatagccagttgtatgagtatgt 66
||||||| ||| ||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 362 tctgtca-tccatataactgcggctatttagagtatgcatagccagttgtatgagtatgt 304
Query: 67 caagaagaaacaatgcattttacacttggctcagaggaagccatgtcccttaaggtacct 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 caagaagaaacaatgcattttacacttggctcagaggaagccatgtcccttaaggtacct 244
Query: 127 taatctatgaaaaaaaaagtttcatttgtttttattctacatgtgcaagtgttttgtctg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 taatctatgaaaaaaaaagtttcatttgtttttattctacatgtgcaagtgttttgtctg 184
Query: 187 cacacatatatctatactatgtgtgtgcctggtgcctatggagtctagtaaaggacgttg 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 cacacatatatctatactatgtgtgtgcctggtgcctatggagtctagtaaaggacgttg 124
Query: 247 agttcctgggtactggagttgtggctggctatgagccactatatggttgctgggagctga 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 agttcctgggtactggagttgtggctggctatgagccactatatggttgctgggagctga 64
Query: 307 acctgggtcctctgaaagaagagcaaatgctcttaaccactgagcaatctctccaaaccc 366
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 63 acctgggtcctctgaaagaagagcaaatgctcttaaccactgagcaatctctccaatccc 4
Query: 367 tgg 369
|||
Sbjct: 3 tgg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space: 426489
Effective search space used: 426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_d07.g1 MSMg01no379_d07.g1 CHROMAT_FILE:
MSMg01no379_d07.g1 PHD_FILE: MSMg01no379_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:54 2005
(473 letters)
>mm_chr6_47203601_47204473
Length = 873
Score = 891 bits (461), Expect = 0.0
Identities = 467/469 (99%)
Strand = Plus / Plus
Query: 1 taagttttctgatacatatctttttaatttttgaaattgtatgtcatagttgctgtgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taagttttctgatacatatctttttaatttttgaaattgtatgtcatagttgctgtgtgg 260
Query: 61 catccattcaactgatcagtccatttgtggcttcctgcaaccatccttgtgtctgattgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catccattcaactgatcagtccatttgtggcttcctgcaaccatccttgtgtctgattgg 320
Query: 121 gtcgatatgctgtctctgacactaagagtttgaaaccacaaagtgcacttcagccatgtt 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcgatatactgtctctgacactaagagtttgaaaccacaaagtgcacttcagccatgtt 380
Query: 181 tctttcaaaggttgccttcttttccaaaccaatatttcctattcatagcagaattattag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctttcaaaggttgccttcttttccaaaccaatatttcctattcatagcagaattattag 440
Query: 241 acgggtaatagggagcagaaaaagtctcactctgacaagggttgtctttgcagtagcacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acgggtaatagggagcagaaaaagtctcactctgacaagggttgtctttgcagtagcacg 500
Query: 301 ctctcagggctaatttaattggagtttatttataaggtgctctgtgaactctctgtgaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctctcagggctaatttaattggagtttatttataaggtgctctgtgaactctctgtgaat 560
Query: 361 aacaaatgctgtgagctcagatttgttgtccagctgactcaagtgactcagaaaagtcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacaaatgctgtgagctcagatttgttgtccagctgactcaagtgactcagaaaagtcct 620
Query: 421 ctaatctctgtcatggttacttttattgccactgtaaccagttcctgac 469
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctaatctctgtcatggttacttttattgccactgtaaccagttcctgac 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
