XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACATGGA
GTGTACCATGGCTCCAGGTGTATATGTAGCAGAAGATGGCCTTATCTGGC
ATCAGTGGGAGGAGCGACCCTTGGTTCTGTGAAGGCTTGATGTCCCAACA
TAGGGGAATGCTAAGGCGGTGAGGCAGGAGTGGGTGGGTAGGGGAGCACC
CTCATAGAGATAGGGGGAGGGGAGAGGTGTATTTTTTGTTTTTTTTTTTT
TTTCTTTTCTCTTTTTTTTTTTTTGTGCTTTTTGTTTCGTTGCTCTCCCT
TTCTCCCTTTTTTTTTTTTATCGCTAATTTCTTATCTTCTTGCTTGTTCT
TTTTTTTTTCTTCTTCTTTTTTTTTTTTCTTTTTTAATTTTTCCCTCTCC
TTTTTTCTTTCTCTATTTCTCTCATAATTCTCTTTCATTCCTTTCATTCC
TTTTTCCTTTACTAATTCCTCCCTCATTTCTGCTTTTTTTTTTTATCTTC
TTCTTCCTTCTCTTCTTTTCTTTCTTTGTTATATTTCTATTTATGTTCTT
TTTTCTTTGCCCCCTTTTCTTTTCTGTTCGTTATCATATCACTTTTATTT
TTATTATTTTTTTTATAATTNACCCTTCTTTTACCTTTTTTTTTATTTCT
TTTCCAGTTCTCTTTCCTATTCCTCTTCGTCACTCTTTTTANTTTCTTTG
TCTTATTACATCTACCTCTCCTCATATTCTGTTCTTTTTCAACATATTCT
CTCTTTTGCCTACTTTTTTTTCCTCTCTTATTTTCGTCTTTTCAATTCTT
TTTCTATTTTTCTCTTTATTTTATCT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTCCATTAACTTTAATGATTGGCATGGGCTAAGGAATGTGAGTGC
TTTCTATGGCCAGCATTTTCAGAAAATGCCCCTCCTAAATCTTCAGTCAC
TTTTTGCTATGATTTTGTTTTTCCTTCTATTTGCTCTCGTTTTATTTTTA
ATCTTAATTATTAATCAAAGAAGATTATTTTGTATGTTTTATGAAGTCTT
CTCTCACTGACTTTAATTTGACGCTAAATCAATTGGAACAAACAAAACAA
AGGCTTCTAAAGGATATTTGTAATACAACATCTAAACCACAGGTTTCAGG
TTAGTTAATAAACAAAATTTTGGCTCCAAACTAATTTTAAAATGTTTATG
TATTAGCTACCAGACACCAAACAATAATTTGTGAGCTATGAATTGCCACA
AAGAGTAGCACATTATTTAACTATTCTTCCAGAGTGTAGGAGTCAGTCAA
ATGTAGTTAAATACCTGTTACATTCCTTTCCCTTTTTTATGGTAAAAGCA
CATACAATTAACACCTTTAAGATATATAATATAGGACTCATATCAACAAG
TACTGCCTTACAGTAATATATCTCTAGATTGACTAATTGTGCTTAGCGAC
TTCTCCTGACCTTTGTTAATCACTGTTTTTTTTNCATTATCTGGTTCTAT
CTATTTGAGGGTTTATATTTTACCATAAAATGATATATGTATGGG

Query= MSMg01no382_d01.g1 MSMg01no382_d01.g1 CHROMAT_FILE:
MSMg01no382_d01.g1 PHD_FILE: MSMg01no382_d01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:51 2005
         (605 letters)



>mm_chr6_16096819_16097823
          Length = 1005

 Score = 1139 bits (589), Expect = 0.0
 Identities = 601/605 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tccattaactttaatgattggcatgggctaaggaatgtgagtgctttctatggccagcat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tccattaactttaatgattggcatgggctaaggaatgtgagtgctttctatggccagcat 746

                                                                       
Query: 61  tttcagaaaatgcccctcctaaatcttcagtcactttttgctatgattttgtttttcctt 120
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 745 tttcagaaaatgcccctcctaattcttcagtcactttttgctatgattttgtttttcctt 686

                                                                       
Query: 121 ctatttgctctcgttttatttttaatcttaattattaatcaaagaagattattttgtatg 180
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 685 ctatttgctctcgttttatttttaatcttaattattaatcaaaaaagattattttgtatg 626

                                                                       
Query: 181 ttttatgaagtcttctctcactgactttaatttgacgctaaatcaattggaacaaacaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttttatgaagtcttctctcactgactttaatttgacgctaaatcaattggaacaaacaaa 566

                                                                       
Query: 241 acaaaggcttctaaaggatatttgtaatacaacatctaaaccacaggtttcaggttagtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acaaaggcttctaaaggatatttgtaatacaacatctaaaccacaggtttcaggttagtt 506

                                                                       
Query: 301 aataaacaaaattttggctccaaactaattttaaaatgtttatgtattagctaccagaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aataaacaaaattttggctccaaactaattttaaaatgtttatgtattagctaccagaca 446

                                                                       
Query: 361 ccaaacaataatttgtgagctatgaattgccacaaagagtagcacattatttaactattc 420
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccaaacaataatttgtgaggtatgaattgccacaaagagtagcacattatttaactattc 386

                                                                       
Query: 421 ttccagagtgtaggagtcagtcaaatgtagttaaatacctgttacattcctttccctttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttccagagtgtaggagtcagtcaaatgtagttaaatacctgttacattcctttccctttt 326

                                                                       
Query: 481 ttatggtaaaagcacatacaattaacacctttaagatatataatataggactcatatcaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttatggtaaaagcacatacaattaacacctttaagatatataatataggactcatatcaa 266

                                                                       
Query: 541 caagtactgccttacagtaatatatctctagattgactaattgtgcttagcgacttctcc 600
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 caagtactgccttacagtaatatatctctagactgactaattgtgcttagcgacttctcc 206

                
Query: 601 tgacc 605
           |||||
Sbjct: 205 tgacc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space:   592025
Effective search space used:   592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)