XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTGTGA
ATGTTTCAGAGGGTAAATGCCTGAGCCTTGATAAGTGTGATTGGTGGTTG
GTGGTCATTCAAGGGGGTTAGTTGAGATTTGTTAGTAGTTGTGCTCAAAG
AAGAGATAAGAGGGAAAAAATTAGATTCAGGGATCTCTATCTCTCCTTTA
AATCTTTTTTTCTGTCGTATTTAGTGATGGGGTGAAACTGGGAGGAATAA
AAGGTAAGAAAGATAAGAACTCACAAAGAAGCAAAGATCAGCAATAAGCA
AATATGAAACAAGAAGAAATTAGATTCAGATCTCTGTTTCTGTCTCTCTG
TCTCTCTCTGTCTCTGTCTCTCTCTGTCTCTGTCTCTCTGTCTCTCTGTC
TCTGTCTCTGTCTGTCTCTCTGTCTCTCTGTCTCTCTGTCTCTCTGTCTC
TCTGTCTCTCTGTCTGTCTCTGTCTCTCTCTCTCTCTGTCTCTCTCTCTG
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATA
TATATATAAAACCTGTCTGTCTGCCTATCTGTTCCCTCTATTCTTCTTTC
TCTCCTATCTAGAGGAAGGGGGAAAAGACAGGTTTGGGGGTGGGAAACCC
CAAAGTATCAAAGAGGATATGGTTCTTCTGTCGGGAATAGTGGTAGTATG
AAGGGGGGGTTCCTCTCCTCTTTATTTTTTTAAAAAGGTTTTAAGAAAAT
TGTGGCGGAGGGGGAN

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTGTAAGAGACTAATTGAAATGGATTGACTCCCAT
ATACACACACTAATTATTAATACATTAGAATTGTGAAAGGCAACTTTGCC
CAGGAACTGAAGATGCTTATGGAAGTAATGGGTCACTAACCGGACATAAT
TGGCCTGATAACTTAATGTATAATTGGTTTCACTGCCTCGTCCTCACTTA
TATCATGAAAATCTTAACCCAATTATCCAAACCAGGAAGAATAAATAAAT
ATGAAGTGTTGATATTATTTTAGGCAGCATCCACAGTAGTAGGTTTTCAC
AGGACTTTTTTTGAAGGCCTTATTTATCCCTCCCAGTTTCTTTCTTCTCC
TCGTTCTACCGTGCCTACACCACTCACCCTTTCACGATCCATCATTCTCT
CTTGTCCCCCATGTTCTATCTCTCCTCCCTCAAGTCCCTCCCCTCCCCCA
TGGCTCTTTACTAATTTCCAGACGTCTGTGGGAATTCAAGTTTTGGAACA
TATACATATATCTGCAGTCTCAAAGCTAACACCTAACAATAAGAGAAAGC
ATGTACCGCTTGTCTTTTTTCAGGGCCCATTTTCTCACTCAGAATGATAG
TTTCTAGCTCCAGCCATTTACCTGCACACTTCATTTTTATTAACAGCTAC
ATAACAAATCCCTGTGTGAATGGAACCCATTTTTTTTAATCCTTATCCTT
GGGGTGTTGCCCCTTTTCTGG

Query= MSMg01no383_b08.g1 MSMg01no383_b08.g1 CHROMAT_FILE:
MSMg01no383_b08.g1 PHD_FILE: MSMg01no383_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:01 2005
         (500 letters)



>mm_chr6_7955866_7956768
          Length = 903

 Score =  911 bits (471), Expect = 0.0
 Identities = 494/503 (98%), Gaps = 3/503 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtaagagactaattgaaatggattgactcccatatacacacactaattattaatacatt 60
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtaagagactagttgaaatggattgactcccatatacacacactaattattaatacatt 260

                                                                       
Query: 61  agaattgtgaaaggcaactttgcccaggaactgaagatgcttatggaagtaatgggtcac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 261 agaattgtgaaaggcaactttgcccaggaactgaagatgcttatggaagtaatgggtcat 320

                                                                       
Query: 121 taaccggacataattg---gcctgataacttaatgtataattggtttcactgcctcgtcc 177
           ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaccggacataattgttggcctgataacttaatgtataattggtttcactgcctcgtcc 380

                                                                       
Query: 178 tcacttatatcatgaaaatcttaacccaattatccaaaccaggaagaataaataaatatg 237
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 tcacttatatcatgaaaatcttaacccaattgtccaaaccaggaagaataaataaatatg 440

                                                                       
Query: 238 aagtgttgatattattttaggcagcatccacagtagtaggttttcacaggactttttttg 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagtgttgatattattttaggcagcatccacagtagtaggttttcacaggactttttttg 500

                                                                       
Query: 298 aaggccttatttatccctcccagtttctttcttctcctcgttctaccgtgcctacaccac 357
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 aaggccttatttatccctcccagtttctttcttctccccgttctaccgtgcctacaccac 560

                                                                       
Query: 358 tcaccctttcacgatccatcattctctcttgtcccccatgttctatctctcctccctcaa 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcaccctttcacgatccatcattctctcttgtcccccatgttctatctctcctccctcaa 620

                                                                       
Query: 418 gtccctcccctcccccatggctctttactaatttccagacgtctgtgggaattcaagttt 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtccctcccctcccccatggctctttactaatttccagacgtctgtgggaattcaagttt 680

                                  
Query: 478 tggaacatatacatatatctgca 500
           ||||||| ||||| |||||||||
Sbjct: 681 tggaacacatacacatatctgca 703


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 903
Length adjustment: 10
Effective length of query: 490
Effective length of database: 893
Effective search space:   437570
Effective search space used:   437570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)