Query= MSMg01no383_e12.b1 MSMg01no383_e12.b1 CHROMAT_FILE:
MSMg01no383_e12.b1 PHD_FILE: MSMg01no383_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:18 2005
(513 letters)
>mm_chr6_34771034_34771946
Length = 913
Score = 973 bits (503), Expect = 0.0
Identities = 506/507 (99%)
Strand = Plus / Plus
Query: 7 attctctacccttagacagatgagccataattgcatgactgggtcatgaaactactacac 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 attctctacccttagacagatgagccataattgcatgactgggtcatgaaactactacac 266
Query: 67 actagctcatccttggttcttgggttttaaaccaaacaaaatgaaaaaagtccacacagt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 actagctcatccttggttcttgggttttaaaccaaacaaaatgaaaaaagtccacacagt 326
Query: 127 attcataatagctttatttatacttgcccaaactggaagcaaccagatgtcttccaataa 186
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 attcataatagctttatttatacttgcccaaactggaagcaaccagatgtcttccaatag 386
Query: 187 atggatgactttttttaagtgtgtccatataatgcactattattcaattattaaaaatga 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atggatgactttttttaagtgtgtccatataatgcactattattcaattattaaaaatga 446
Query: 247 gttgtcaaacaataaagatataacagaacagaaacttgagtccatatcacaaccacatca 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gttgtcaaacaataaagatataacagaacagaaacttgagtccatatcacaaccacatca 506
Query: 307 agtgggtttcatctcgatgagaacaaagtcaaaacaaaccatggccaagaaataataact 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 agtgggtttcatctcgatgagaacaaagtcaaaacaaaccatggccaagaaataataact 566
Query: 367 gagaaagatttgctacctctagcaggtacggagagccaaaagcaatgccttccttaaagg 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gagaaagatttgctacctctagcaggtacggagagccaaaagcaatgccttccttaaagg 626
Query: 427 cagtgtgggaattttacttagaaagcctataaagattaatataagaaagcactataagga 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 cagtgtgggaattttacttagaaagcctataaagattaatataagaaagcactataagga 686
Query: 487 tggacttccctgagcatgctcagttaa 513
|||||||||||||||||||||||||||
Sbjct: 687 tggacttccctgagcatgctcagttaa 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_e12.g1 MSMg01no383_e12.g1 CHROMAT_FILE:
MSMg01no383_e12.g1 PHD_FILE: MSMg01no383_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:18 2005
(459 letters)
>mm_chr6_34962176_34963034
Length = 859
Score = 820 bits (424), Expect = 0.0
Identities = 451/460 (98%), Gaps = 2/460 (0%)
Strand = Plus / Minus
Query: 1 acttgtaagtaatgacaccgggttatctgtcaaggcttgatgctttactgtg-agtacta 59
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 659 acttgtaagtaatgacaccgggttatctgtcaaggcttgatgctttactgtgaagtgcta 600
Query: 60 agcggcctccccagtcacagcctttagctgagtactctttaaatgaagtgacagacagtt 119
|||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 599 agcggcctccccggtcacagcctttagctgagaactctttaaatgaagtggcagacagtt 540
Query: 120 tcaccacttatccaccagccttgggaagaccctgccctatttttgacctctgtttcttca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tcaccacttatccaccagccttgggaagaccctgccctatttttgacctctgtttcttca 480
Query: 180 tctgtatcctatggtcacggtctctgtcgcttcaagacttacctgaagtactgcaaatga 239
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tctgtctcctatggtcatggtctctgtcgcttcaagacttacctgaagtactgcaaatga 420
Query: 240 ctgtgcccaagaaccaaagtaccacccagaagcaagaattgctgttgtagtaacttcctg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ctgtgcccaagaaccaaagtaccacccagaagcaagaattgctgttgtagtaacttcctg 360
Query: 300 cagaatgcttttgtggggttccccctctgaaatccgtctgctgggttttgtgttggtatt 359
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 359 cagaatgcttttgtggggttccccctctg-aatccgtctgctgggttttgtgttggtatt 301
Query: 360 tggagatttgagcagaagaagaatagatttctctagtgttgataacgtcttagcatctgg 419
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 300 tggagatttgagcagaagaagaatagatttctctagtgttgataatgtcttagcatctgg 241
Query: 420 gcagcccttataggccacattgctctctgaatctcaggcc 459
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gcagcccttataggccacattgctctctgaatctcaggcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
