Query= MSMg01no383_n22.b1 MSMg01no383_n22.b1 CHROMAT_FILE:
MSMg01no383_n22.b1 PHD_FILE: MSMg01no383_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:02 2005
(566 letters)
>mm_chr6_148608398_148609360
Length = 963
Score = 725 bits (375), Expect = 0.0
Identities = 386/391 (98%), Gaps = 3/391 (0%)
Strand = Plus / Minus
Query: 176 catcgctcagtggtagagtcctcacgtctcacctgcaaggccctgagttcacttctcagc 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 catcgctcagtggtagagtcctcacgtctcacctgcaaggccctgagttcacttctcagc 904
Query: 236 accatgaggggaaaagaaaaggaagaatggggaagcctaggctgtaagtacctcttcttc 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 accatgaggggaaaagaaaaggaagaatggggaagcctaggctgtaagtacctcttcttc 844
Query: 296 tctttgatccctgacacttccacatgaataagcccagctctcctgctagagggtgagaag 355
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 cctttgatccctgacacttccacatgaataagcccagctctcctgctagagggtgagaag 784
Query: 356 ataagaggccatgtggagcaaggacagatgaccctctttgagaactcacactcattagag 415
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 783 ataagaggccatgtggagcaaggacagatgaccctctttgaggactcacactcattagag 724
Query: 416 aggttgcctgaagtcagcagaggtgatcttccaaagatgcacaagtgagccaggatgaga 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 aggttgcctgaagtcagcagaggtgatcttccaaagatgcacaagtgagccaggatgaga 664
Query: 476 cagaggagctgcccagcagaaccctgccccagcggctgacccatgcagtgctatactagg 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 cagaggagctgcccagcagaaccctgccccagcggctgacccatgcagtgctatactagg 604
Query: 536 aatatccatctttttttttttttatctttag 566
||||||||| |||||||||||||||||||
Sbjct: 603 aatatccat---tttttttttttatctttag 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 963
Length adjustment: 10
Effective length of query: 556
Effective length of database: 953
Effective search space: 529868
Effective search space used: 529868
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_n22.g1 MSMg01no383_n22.g1 CHROMAT_FILE:
MSMg01no383_n22.g1 PHD_FILE: MSMg01no383_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:02 2005
(465 letters)
>mm_chr6_148436251_148437115
Length = 865
Score = 779 bits (403), Expect = 0.0
Identities = 440/465 (94%), Gaps = 20/465 (4%)
Strand = Plus / Plus
Query: 1 caagaagtagacctggaaagagggaaggaaatcaagaacctctggttctcagagaacatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagaagtagacctggaaagagggaaggaaatcaagaacctctggttctcagagaacatg 260
Query: 61 gggctttggacatcacaccagagtggtgagagcgattgattgccctgtctgttcagagaa 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 gggctttggacatcacaccagagtggtgagagtgattgattgccctgtctgttcagagaa 320
Query: 121 gcataggcctctctgccttggtgtgtatagatcctctgccttggtgtgcaaacccccctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcataggcctctctgccttggtgtgtatagatcctctgccttggtgtgcaaacccccctg 380
Query: 181 ccttggcatgttcaagggagagaaaagtggtgaaaaggaatagtcagtaagtgaaacctc 240
|||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 ccttggcatgttcaagggagagaaaagtggtgaaaa--------------------cctc 420
Query: 241 aagttaacacaaagccacaaaggacaatggcagacattaggccccacacctgactttggt 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 421 aagttaacacaaagccacaaaggacaatggcagacactaggccccacacctgactttggt 480
Query: 301 atctggcccaagtatcaatcatctaattaggtagtgtgatatgacttcacattggcctta 360
||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 481 atctggcccaagtgtcaatcatctaattaggtagtgtgatatgacttcacaatggcctta 540
Query: 361 ctggataagactttggagatttaatgtaaggtcaaagttgtattttgaatttcccaacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctggataagactttggagatttaatgtaaggtcaaagttgtattttgaatttcccaacat 600
Query: 421 atttaagagcagaggtgatattatatgctccctctttctttcttt 465
|||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 601 atttaagagcagaggtgatattctatgctccctctttctttcttt 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
