XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAT
TATTCTGCCATCCTTATATGCAGGTTTCACTCACCAGAATAGAGCAGGGG
TCACCAGCATTGTGCCTTCTACCTGTTAAATTCCTATCAGCAGCTAACAG
AAGCTGAGAGTCAATGGCCTGATTCATATGGGGATGACACTTAACTATTT
TTTGCCAAGCCCAGATGGCTGGAAAAAGATGGCTTCTTGGCTGCACTGCT
TGGCAAGGTCTGGACCTTTGTCAGCTTTAGATAACATGAACTGTCCCCTA
AAATGCTTATTGAGCAGCAGTAAGAAACAGAGCCAGCTTTATGGGTCCCA
GATTCTTTTCCTCAGGACCCACCCAAACTTTACTATTTCTGCTGTCATTT
TTCTTTTCAACTACTTCTTCCCAGTCCAAGTTACAAGAGAAAAACCTCAC
CCTTCTCAGAAAACTACTGCCACACCCCAGCATCCAATTCCCCAGACTCC
ACGCAAAGTTCTAAAATATCACCAGAATAAGGTTTACTGCTCTTAGTTTA
TTTTAGCTTAAAGTCTTTTTTCTCTGTCCCCCAAATGAGAAGAGTTTCTT
AGATGGATAGATACTGAATAGATGGATGGATGGATGGATGGATGGATGGA
TGCCCCCCTCCCCCCCCCCCCCCCTTTTTCCCCCCTTTTTCCTTTCCTTC
CTTTTCCTCCCCCCCCCCCT

AGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCCTCTGAAGAAACAGACTGGGAGGAAGAAGC
AGCTCATTATGAGAAAAAAGGGTACCAGCCAGGTAAAGTGCTAGCTAATC
AGTTAAGGAAGCCAAAAGCGGCTGGCGAAGGCCAGTTTGCTGATTGGCCT
CAGGGCAGTCGGCTTCAAGGTCCGCCCTATGTGGAGTCCCCGCCCTGCGT
AGTGCGTCAGCCCTGCGCAGAGAGACAATGCGCAGAGAGGCAATGCGCAG
ACTCATTCATTCCCAGAGAGGAACAAAGGAAAATACAACAGGCATTTCCA
GTCTTTGAAGGAGCCGAGGGTGGGCGTGTCCACGCTCCGGTAGAATACGT
ACAGATTAAAGAACTTGCCGAGTCGGTCCGTAAATACGGAACCAATGCTA
ATTTTACCTTGGTGCAGTTAGACAGGCTCGCCGGCATGGCACTAACTCCT
GCTGACTGGCAAATGATTGTAAAAGCCGCTCTCCCTAGTATGGGCAAATA
TATGGAATGGAGAGCTCTTTGGCATGAAGCTGCACAAGCGCAGGCCCGAG
CAAACGCAGCTGCTTTGACTCCAGAGCAGAGAGATTGGACTTTTGACTTG
TTAACGGGTCAGGGAGCTTATTCTGCTGATCAGACAAACTACCATTGGGG
AGCTTATGCCCAGATTTC

Query= MSMg01no384_i02.b1 MSMg01no384_i02.b1 CHROMAT_FILE:
MSMg01no384_i02.b1 PHD_FILE: MSMg01no384_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:49 2005
         (604 letters)



>mm_chr6_111658069_111659072
          Length = 1004

 Score = 1083 bits (560), Expect = 0.0
 Identities = 590/600 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcattattctgccatccttatatgcaggtttcactcaccagaatagagcaggggtc 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattattctgtcatccttatatgcaggtttcactcaccagaatagagcaggggtc 264

                                                                       
Query: 65  accagcattgtgccttctacctgttaaattcctatcagcagctaacagaagctgagagtc 124
           ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 265 accagcattatgccttctacctgttaaattcctatcagcagctaacagaagcggagagtc 324

                                                                       
Query: 125 aatggcctgattcatatggggatgacacttaactattttttgccaagcccagatggctgg 184
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aatggcctgagtcatatggggatgacacttaactattttttgccaagcccagatggctgg 384

                                                                       
Query: 185 aaaaagatggcttcttggctgcactgcttggcaaggtctggacctttgtcagctttagat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaaagatggcttcttggctgcactgcttggcaaggtctggacctttgtcagctttagat 444

                                                                       
Query: 245 aacatgaactgtcccctaaaatgcttattgagcagcagtaagaaacagagccagctttat 304
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aacatgagctgtcccctaaaatgcttattgagcagcagtaagaaacagagccagctttat 504

                                                                       
Query: 305 gggtcccagattcttttcctcaggacccacccaaactttactatttctgctgtcattttt 364
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gggtcccagattcttttcctctggacccacccaaactttactatttctgctgtcattttt 564

                                                                       
Query: 365 cttttcaactacttcttcccagtccaagttacaagagaaaaacctcacccttctcagaaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttttcaactacttcttcccagtccaagttacaagagaaaaacctcacccttctcagaaa 624

                                                                       
Query: 425 actactgccacaccccagcatccaattccccagactccacgcaaagttctaaaatatcac 484
           ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 625 actactgccacaccccagcatccaattccccagaccccatgcaaagttctaaaatatcac 684

                                                                       
Query: 485 cagaataaggtttactgctcttagtttattttagcttaaagtcttttttctctgtccccc 544
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 685 cagaataaggttaactgctcttagtttattttagcttaaagtcttttttctctgtcctcc 744

                                                                       
Query: 545 aaatgagaagagtttcttagatggatagatactgaatagatggatggatggatggatgga 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaatgagaagagtttcttagatggatagatactgaatagatggatggatggatggatgga 804


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space:   590436
Effective search space used:   590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)