Query= MSMg01no384_j06.b1 MSMg01no384_j06.b1 CHROMAT_FILE:
MSMg01no384_j06.b1 PHD_FILE: MSMg01no384_j06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:54 2005
(531 letters)
>mm_chr6_144085617_144086546
Length = 930
Score = 990 bits (512), Expect = 0.0
Identities = 518/520 (99%), Gaps = 1/520 (0%)
Strand = Plus / Minus
Query: 5 gaattcttgtgaagacagccatcttcccaactgtctaacactgagggcacatgactaact 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gaattcttgtgaagacagccatcttcccaactgtctaacactgagggcacatgactaact 460
Query: 65 gtatagcagagcatcccagctgtgtcacagactggttattaagcagtccagccaaggaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gtatagcagagcatcccagctgtgtcacagactggttattaagcagtccagccaaggaat 400
Query: 125 aatttagtatatacattcaactgtgatatcacagccgaaggaaactatggggataaaatg 184
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 399 aatttagtatatacattcaactgtgatatcacagctgaaggaaactatggggataaaatg 340
Query: 185 agcccatgactaatgtaaattaataaatgcatttggtgttaaagaattctgtttccagtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 agcccatgactaatgtaaattaataaatgcatttggtgttaaagaattctgtttccagtc 280
Query: 245 tgggcataagacaaacagagtttaaacatttttttgtctgctttgcctagtattaaatat 304
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 279 tgggcataagacaaacagagtttaaaca-ttttttgtctgctttgcctagtattaaatat 221
Query: 305 tagagaggatctagagcagtggttctcaacctgtgggtcacaacccccttgcaggtcaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tagagaggatctagagcagtggttctcaacctgtgggtcacaacccccttgcaggtcaca 161
Query: 365 tgacctttcacaggggtcatatatgagataccctgcatttcagatatttacattatgatt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 tgacctttcacaggggtcatatatgagataccctgcatttcagatatttacattatgatt 101
Query: 425 cataacactaacaagattagagttatgaagtagcaataaaagtaattttatgactgggag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 cataacactaacaagattagagttatgaagtagcaataaaagtaattttatgactgggag 41
Query: 485 gtaccataatatgaggaacggtatgtatatatagggtcat 524
||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 gtaccataatatgaggaacggtatgtatatatagggtcat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 930
Length adjustment: 10
Effective length of query: 521
Effective length of database: 920
Effective search space: 479320
Effective search space used: 479320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_j06.g1 MSMg01no384_j06.g1 CHROMAT_FILE:
MSMg01no384_j06.g1 PHD_FILE: MSMg01no384_j06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:54 2005
(604 letters)
>mm_chr6_143942377_143943380
Length = 1004
Score = 1168 bits (604), Expect = 0.0
Identities = 604/604 (100%)
Strand = Plus / Plus
Query: 1 tagaagacaagtcattaggcactgcttaaaacaactactgagcattttagtagggagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagaagacaagtcattaggcactgcttaaaacaactactgagcattttagtagggagaaa 260
Query: 61 aaaaagcccagtttaacaaaatataggtaattgggaggggatgaaaaaagatttatatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaagcccagtttaacaaaatataggtaattgggaggggatgaaaaaagatttatatat 320
Query: 121 cttaaaatatgacataaacatttttgttctagttcaattattaaggtggacgccaaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttaaaatatgacataaacatttttgttctagttcaattattaaggtggacgccaaaagg 380
Query: 181 ttaaatattttaaaatttatcttttataaacaaatatgaatttagacagagttcatgcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaaatattttaaaatttatcttttataaacaaatatgaatttagacagagttcatgcct 440
Query: 241 aagaatatatgtcaccctgggagaatctcagaagacttacccccactccaaatttaccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagaatatatgtcaccctgggagaatctcagaagacttacccccactccaaatttaccac 500
Query: 301 caagaaaggtcaaatccattttgaatcatacccatcaaagttggggttttaattgagtgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caagaaaggtcaaatccattttgaatcatacccatcaaagttggggttttaattgagtgg 560
Query: 361 ttgtagtttctaattatatttggatgtgaaccaaatgaagatatttgttcattaaaacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgtagtttctaattatatttggatgtgaaccaaatgaagatatttgttcattaaaacca 620
Query: 421 gagaaaccatattttactttgactaaaaacaacacttaaatattatctcccgcggatatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagaaaccatattttactttgactaaaaacaacacttaaatattatctcccgcggatatc 680
Query: 481 aatgggaatcctgaacagagttcaagtacaggctttggccctggcgttaatctgaaatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatgggaatcctgaacagagttcaagtacaggctttggccctggcgttaatctgaaatct 740
Query: 541 cttgaaatgagaaatgataagaaaaaaaattactacaggaaagatttcagagaggatatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cttgaaatgagaaatgataagaaaaaaaattactacaggaaagatttcagagaggatatt 800
Query: 601 accc 604
||||
Sbjct: 801 accc 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
