Query= MSMg01no385_c11.b1 MSMg01no385_c11.b1 CHROMAT_FILE:
MSMg01no385_c11.b1 PHD_FILE: MSMg01no385_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:38 2005
(556 letters)
>mm_chr6_106324483_106325438
Length = 956
Score = 1060 bits (548), Expect = 0.0
Identities = 551/552 (99%)
Strand = Plus / Minus
Query: 5 gaattcatgagtggactccatttctattttgtacagtgacatgcagatttcaaaaccagc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 gaattcatgagtggactccatttctattttgtacagtgacatgcagatttcaaaaccagc 697
Query: 65 atgagattttacatgcttaaggacagtcagtgaccctgggaatcttgtagtaagatgcac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 atgagattttacatgcttaaggacagtcagtgaccctgggaatcttgtagtaagatgcac 637
Query: 125 aaattctcatctcttctgtcccttgtcactgccatcttgagttctgctgcgtttaccttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aaattctcatctcttctgtcccttgtcactgccatcttgagttctgctgcgtttaccttg 577
Query: 185 tctctgtgtactctaactcaagggcagatctgttctgaacccttgacttctctatgcaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tctctgtgtactctaactcaagggcagatctgttctgaacccttgacttctctatgcaac 517
Query: 245 catagtacctttgcatatgctaagttactttatctagaacatcctttcctgtttatcctt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 catagtacctttgcatatgctaagttactttatctagaacatcctttcctgtttatcctt 457
Query: 305 cagatcacattttactctttccttcagagtggttggttccctttagtaaccccattcaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cagatcacattttactctttccttcagagtggttggttccctttagtaaccccattcaat 397
Query: 365 gtttgatgcttttatcacccatgtcttcaacccttggtatttttctcaacattgattgca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gtttgatgcttttatcacccatgtcttcaacccttggtatttttctcaacattgattgca 337
Query: 425 actagagattgtttcttgtatgactatttgggtgacatttttattccccaattgaaaata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 actagagattgtttcttgtatgactatttgggtgacatttttattccccaattgaaaata 277
Query: 485 aactatgcaagataagcaagtagatctgattatttttaacctttctatacagtacatact 544
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aactatgcaatataagcaagtagatctgattatttttaacctttctatacagtacatact 217
Query: 545 cagaaaactttg 556
||||||||||||
Sbjct: 216 cagaaaactttg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_c11.g1 MSMg01no385_c11.g1 CHROMAT_FILE:
MSMg01no385_c11.g1 PHD_FILE: MSMg01no385_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:38 2005
(511 letters)
>mm_chr6_106192897_106193808
Length = 912
Score = 942 bits (487), Expect = 0.0
Identities = 506/513 (98%), Gaps = 3/513 (0%)
Strand = Plus / Plus
Query: 1 ttctttatcaaccatatttattttgggaaaccatcatcttaaactgtcactttttcttaa 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctttatcaaccgtatttattttgggaaaccatcatcttaaactgtcactttttcttaa 260
Query: 61 atatacttactccttcttaaactactaaccacaaagtagcagt--tgactgtttaccaca 118
|||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct: 261 atatacttactccttcttaaactactgaccacaaagtagcagtact-actgtttaccaca 319
Query: 119 aagtctttcacctgtctgagcaacattgctattagttcccaggtgttttacttactttta 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aagtctttcacctgtctgagcaacattgctattagttcccaggtgttttacttactttta 379
Query: 179 tttccaaaaccatatcagaaatcacttgtttaaattaattcattaaggactttacaatta 238
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttttcaaaaccatatcagaaatcacttgtttaaattaattcattaaggactttacaatta 439
Query: 239 ttataatatctaaccttgtactaatattaatcaatgatataaattttaggtttctgaaat 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttataatatctaaccttgtactaatattaatcaatgatataaattttaggtttctgaaat 499
Query: 299 tgacctttcgtgcttatatccagaagggattagcttatggtgtcatttgagaggtggctg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgacctttcgtgcttatatccagaagggattagcttatggtgtcatttgagaggtggctg 559
Query: 359 aaagtccctctgtattgaagtatctctttgccttggaataccttggaggtcataagctat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaagtccctctgtattgaagtatctctttgccttggaataccttggaggtcataagctat 619
Query: 419 tgctccaagagtagttggagccatcctccctccagcctttcctaatataaaacacataac 478
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgctccaaaagtagttggagccatcctccctccagcctttcctaatataaaacacataac 679
Query: 479 attaagatggctttagtgggatgatggatttgg 511
|||||||||||||||||||||||||||||||||
Sbjct: 680 attaagatggctttagtgggatgatggatttgg 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 912
Length adjustment: 10
Effective length of query: 501
Effective length of database: 902
Effective search space: 451902
Effective search space used: 451902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
