Query= MSMg01no385_n20.b1 MSMg01no385_n20.b1 CHROMAT_FILE:
MSMg01no385_n20.b1 PHD_FILE: MSMg01no385_n20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:33 2005
(571 letters)
>mm_chr6_122421741_122422711
Length = 971
Score = 1050 bits (543), Expect = 0.0
Identities = 563/571 (98%), Gaps = 6/571 (1%)
Strand = Plus / Plus
Query: 4 ggaattctcagattttcccgaaccattcagatccgtcaaagaggttatatgcagcttgtt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcagattttcccgaaccattcagatccgtcaaagaggttatatgcagcttgtt 263
Query: 64 tgtgtgctaccctgaggtttgtttattcatatttattttgtttgtgtcgacaagttcttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtgtgctaccctgaggtttgtttattcatatttattttgtttgtgtcgacaagttcttt 323
Query: 124 ctctcatagctgtctggctatgatctccagccatgcctctactggcatgaaccaccatat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctctcatagctgtctggctatgatctccagccatgcctctactggcatgaaccaccatat 383
Query: 184 ccattatcttctgaacacatgtgagacattagaaatgtatgtaccacctgaggcagatga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccattatcttctgaacacatgtgagacattagaaatgtatgtaccacctgaggcagatga 443
Query: 244 tcatgagccacatctgataggttattttaattaatgctgcagatattatctaaagggata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcatgagccacatctgataggttattttaattaatgctgcagatattatctaaagggata 503
Query: 304 aaaaaaaatcacattagttaagaaattagttaactaattcccattagttaagaaattcct 363
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaaaaaa-tcacattagttaagaaattagttaactaattcccattagttaagaaattcct 562
Query: 364 taagaggcttagaaaagaagaa---aaaaagaaattccttaagttatttaaattgtgtat 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 563 taagaggcttagaaaagaagaagaaaaaaagaaattccttaagttatttaaattgtgtat 622
Query: 421 atttaaataacttttcaccgtgcagtctttgctgtcctagaatcactctatacaccagac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atttaaataacttttcaccgtgcagtctttgctgtcctagaatcactctatacaccagac 682
Query: 481 tggccttgcactcagctctccagctctttcacacatgatacgattagaactctaagagct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 683 tggccttgcactcagctctccagctctttcacacatgatacgattagaactctgagagct 742
Query: 541 cctatgtcttctataacagagctgctctgtg 571
| || |||||||||||||||||||||||||
Sbjct: 743 c-taa-tcttctataacagagctgctctgtg 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_n20.g1 MSMg01no385_n20.g1 CHROMAT_FILE:
MSMg01no385_n20.g1 PHD_FILE: MSMg01no385_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:33 2005
(473 letters)
>mm_chr6_122586362_122587234
Length = 873
Score = 893 bits (462), Expect = 0.0
Identities = 470/473 (99%)
Strand = Plus / Minus
Query: 1 tggatgtattcctggctggtctgctggtcctgtaacagtacgaggatgaggtgttcaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tggatgtattcctggctggtctgctggtcctgtaacagtacgaggatgaggtgttcaaag 614
Query: 61 ccacccatcactatttaagaagctggaggccagccaggaggtggtggcactggactttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ccacccatcactatttaagaagctggaggccagccaggaggtggtggcactggactttga 554
Query: 121 tcctagcactctctggaggcagaaggggatagagttggaggctgggtggcaatgaggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tcctagcactctctggaggcagaaggggatagagttggaggctgggtggcaatgaggatg 494
Query: 181 cagacttgccagcaggtggagcagaagacaaagatggttaaaaacaaaaccaaagccgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cagacttgccagcaggtggagcagaagacaaagatggttaaaaacaaaaccaaagccgga 434
Query: 241 tctggcgtaagggttactgccatcatccagatttgagaaagcaaaataactcctgcatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tctggcgtaagggttactgccatcatccagatttgagaaagcaaaataactcctgcatga 374
Query: 301 ttttacaactgagagaattcctgggttggcagccctaaaagcagatgctgtatttaccac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ttttacaactgagagaattcctgggttggcagccctaaaagcagatgctgtatttaccac 314
Query: 361 caacatcaatatttttgtaaaggttagatctcaacaaagggtagataacgggtcactgtc 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 313 caacatcaatatttttgtaaaggtttgatctcaacaaagggtagataacgggtcactgtc 254
Query: 421 cggngcaattcaaatcagctaacagtatccttccgcatgaacattccgcagaa 473
||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 253 cggggcaattcaaatcagctaacagtatccttccgcatgaacattccacagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
