CCTCCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTATAAAATATCACTGTTCTTTGAGGATCTAGCCAGTGAGGTCAA
TCAAAGCCTGTTTTCTTTTATATTCTGGAAAGTCACAGCATGACAGGTAG
ATTCTGAGAAGTTATCTTTAGCACTTTGTATTCCCGTGTGCATTGGGAGG
CTATTTCTGGTGTTTGAACCTTGAGTTTGAAACCGCTAGTCAAACCACTG
AGTTGTAACTCAAACCCTTGTTTGCTTTTTATCTTCAGTAGATCTGTTAG
GTTTGTCCTTGGAGTAGACATCTGGCATGTTCTATTGTTTGGAAGCAGGA
GGAGATCCCAGATATCACTGGTAAATATGGTTGAAAACATGTTTATGTCT
TGAATACACACCAACAACAAAGGACCAGTTAAGACTGTGGGAGTTGAAAA
AGAAAACTTTTGTTATAGAAGATGAATGAAACCCTTATATAAGATCATTT
ACATATTTGATACTCAGTGATGGATATTATGAGTCACGGTGGTAATTACT
ATGGAAAGCACCACTCTGTTGCCGAAATGGACTTTCTGAAAAAATGCTCT
CAATACATTTGAAGCAAGGTGTTCCCACTTTCACAAGATTCTTGGTCAAG
TGAAGAACGAGTCTCACATTATGCTTCCTCACCTACCTCCCTAACAATAA
ACACTGATTATCGCTACCTAACCCCCGAATA

CCCATCCCCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCCTACACTGGTGCA
TCGAGCCTTCACAGGACCAAGAACCTCTTCTCCCATTGAGAAGACCCTTC
TTCCAACAAGGACATTCTCTGCTACATATACAGCTAGAGCCATGGGCACC
TCCAAGAGTACTCTTTGGCGGGTGGTTAGACGCTGGGAGCTCCGGTTGGT
TGATGTTGTTCTTCCTCTGGCTTTGCAAACCCCTTCAGTTCCTTCAGTCC
TTTCTCTAACTCCTCCAATGGGGACACTGACATCAGTTCAATGATTGGAT
GTGAGCATTCAACTCTGTATATCAGGCTCTGACAGAGCCTCTCAGGAGAC
AGCTATATTAGGGTCCTCTCAGCATGCACTTCTTGACATCCACAATAGTG
TCTGGGTTTGGTGACTACATATGGGATGGATCCCTAGGTTGGGCAGTCTC
TGGGTGGCCTTTCCTTCTGTCTTTGCTCCACACTTTGTCTTGGCATTTGC
TCCCGTGAGTATTTTGTTCCCTCCTTCCAGAATAACCCTATTATATTCTC
TTTTGATCTTTCCCTTCCTCTTGAACTTCATGGGGCTCCGATAATATATA
TCCTTAGGCAATCTCGAGATTTCGAACCTAATCTCCCCCCTTTACACAGA
TAATCTGAGCCCGGTCGTATATTTCTATCAATACCGGG

Query= MSMg01no387_b01.b1 MSMg01no387_b01.b1 CHROMAT_FILE:
MSMg01no387_b01.b1 PHD_FILE: MSMg01no387_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:00 2005
         (513 letters)



>mm_chr6_77340410_77341323
          Length = 914

 Score =  903 bits (467), Expect = 0.0
 Identities = 500/511 (97%), Gaps = 1/511 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattctataaaata-tcactgttctttgaggatctagccagtgaggtcaatcaaagcct 62
           ||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 204 gaattctataaaagattcactgttgtttgaggatctagccagtgaggttaatcaaagcct 263

                                                                       
Query: 63  gttttcttttatattctggaaagtcacagcatgacaggtagattctgagaagttatcttt 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gttttcttttatattctggaaagtcacagcatgacaggtagattctgagaagttatcttt 323

                                                                       
Query: 123 agcactttgtattcccgtgtgcattgggaggctatttctggtgtttgaaccttgagtttg 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agcactttgtattcccgtgtgcattgggaggctatttctggtgtttgaaccttgagtttg 383

                                                                       
Query: 183 aaaccgctagtcaaaccactgagttgtaactcaaacccttgtttgctttttatcttcagt 242
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaactgctagtcaaaccactgagttgtaactcaaacccttgtttgctttttatcttcagt 443

                                                                       
Query: 243 agatctgttaggtttgtccttggagtagacatctggcatgttctattgtttggaagcagg 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agatctgttaggtttgtccttggagtagacatctggcatgttctattgtttggaagcagg 503

                                                                       
Query: 303 aggagatcccagatatcactggtaaatatggttgaaaacatgtttatgtcttgaatacac 362
           ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 504 aggagatcccagatatcactggtaaatatggttaaaaacatgtttatttcttgaatacac 563

                                                                       
Query: 363 accaacaacaaaggaccagttaagactgtgggagttgaaaaagaaaacttttgttataga 422
           |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 accaacaataaagtaccagttaagactgtgggagttgaaaaagaaaacttttgttataga 623

                                                                       
Query: 423 agatgaatgaaacccttatataagatcatttacatatttgatactcagtgatggatatta 482
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agatgaattaaacccttatataagatcatttacatatttgatactcagtgatggatatta 683

                                          
Query: 483 tgagtcacggtggtaattactatggaaagca 513
           |||||||| ||||||||||||||||||||||
Sbjct: 684 tgagtcactgtggtaattactatggaaagca 714


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 914
Length adjustment: 10
Effective length of query: 503
Effective length of database: 904
Effective search space:   454712
Effective search space used:   454712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)