Query= MSMg01no387_h10.b1 MSMg01no387_h10.b1 CHROMAT_FILE:
MSMg01no387_h10.b1 PHD_FILE: MSMg01no387_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:31 2005
(277 letters)
>mm_chr6_127641000_127641679
Length = 680
Score = 482 bits (249), Expect = e-140
Identities = 269/277 (97%), Gaps = 3/277 (1%)
Strand = Plus / Minus
Query: 4 ggaattcagtgataattaccacagaggtgcgca---cataatggtcttgaattatgcagg 60
|||||| |||||||| || |||||||||||||| ||||||||||||||||||||||||
Sbjct: 480 ggaatttagtgataaataacacagaggtgcgcacatcataatggtcttgaattatgcagg 421
Query: 61 aggggtgatctccgaagtaagacttcccctgctcccatttctttctggtactgttgggaa 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aggggtgatctctgaagtaagacttcccctgctcccatttctttctggtactgttgggaa 361
Query: 121 ggcagggctggaatcttataccaggactggatcaaggtgctgggtaccacacagggcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ggcagggctggaatcttataccaggactggatcaaggtgctgggtaccacacagggcaag 301
Query: 181 ctcacaggcaagggaggctatctgaaggagggaagggtaagaaagggagtgtcagtaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ctcacaggcaagggaggctatctgaaggagggaagggtaagaaagggagtgtcagtaaag 241
Query: 241 ctgggaaaccggctgagctgtagagttagcaccaatg 277
||||||||| |||||||||||||||||||||||||||
Sbjct: 240 ctgggaaacgggctgagctgtagagttagcaccaatg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 680
Length adjustment: 9
Effective length of query: 268
Effective length of database: 671
Effective search space: 179828
Effective search space used: 179828
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no387_h10.g1 MSMg01no387_h10.g1 CHROMAT_FILE:
MSMg01no387_h10.g1 PHD_FILE: MSMg01no387_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:31 2005
(356 letters)
>mm_chr6_127511177_127511933
Length = 757
Score = 621 bits (321), Expect = 0.0
Identities = 348/357 (97%), Gaps = 1/357 (0%)
Strand = Plus / Plus
Query: 1 ctgacagctgcgagccagaaggcagggggacaactcagacagccgcactggacgcccctg 60
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 ctgacagctgcgagtcagaaggcagggggacaactcggacagccgcactggacgcccctg 260
Query: 61 caggtaatcggaggaaggtcttgggaggcttcgccccaaaccctctgctgggcagcagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggtaatcggaggaaggtcttgggaggcttcgccccaaaccctctgctgggcagcagag 320
Query: 121 aacgcacttcctgcagaccagcaaagtacaaggagaggctggcctggacggcatgcaccc 180
||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 321 aacgcacttcctgcagaccagcaaaacacaaggagaggctggcctggactgcatgcaccc 380
Query: 181 tgggacaagcatcccagccttggcttccccaggcctggttaggccctctgtcctgcaccc 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 tgggacaagcatcccagccttggcttccccaggcctggttaggccctctgccctgcaccc 440
Query: 241 taaaagggactataaaagcttaggagcaccagggtttagaaagtgcccccatcccctcgg 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 taaaagggactataaaagcttaggagcaccagggtttagaaagagcccccatcccctcgg 500
Query: 301 acccttcagtcacacccagactgttttacagaggaaactaacactt-attggtgaag 356
||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 501 acccttcagtcacacccagactgttttacagaggaaactaagactttattggtgaag 557
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 757
Length adjustment: 9
Effective length of query: 347
Effective length of database: 748
Effective search space: 259556
Effective search space used: 259556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
