XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGGGATT
CTTTCTTCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTC
CTCCTCCTCCTCCTCCACCACCACCACCACCACCACCACCACCACCTCCT
CCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTAT
TAATGGTTTTGCAAGACAGGGTTTCTCGGAAGAGCTCTGGCTGTCCTGGA
ACTCACGTTGAAGACGAGGCTGGCCGCAAACAAAGAAATCTGCCTGCCTA
TGCCTCTCGAGTGCTGGCATTAAAGCTGTGAGCCACCACGCCCAGCCAAT
TCTCTTTTTTCTTTTTCTTTTTTTTTTTAAACTTTTTTCTAAGAGTCAGA
GACACCCTCATATCCCCAATGTTGGAAGGGCCACAAGAAAACCAAGCAAC
ACAAGGGAAAGCTATTTCTTATTCAGNTTTAATCTTTCAAATTCAAGATA
AATGGTATCACATTTAGTTCAAGAGAAAGCAAAAAAAAATCCAGGCTTTC
CGTAAAAGGAAAACACGGGGAAGACAAAAATAAAGGGTAATCCGGAAAGA
AAAAGGCTCTTTTGGGGCCTCTGGAAAAAGGGAAGGTGGAAAAAGGCGTG
GGAGAAAAAAAAGAAAAAAAGGGTTTAAAAGCGCCCAAGGGGAAACAAAC
CAGAGGGGGAAAGGGTCTTTTTCTAGAGGAAAAAGAAAAG

AGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTTTTGATAAATATATGTATTGAGTCTATTTTGC
CATTAGATAAATTGAATTTTCTTGTTTTTAAAACTATTTACTGAAAACAT
ATTTAATAAATTTCATCACATTTTAAAATCATGATTAATATTTATGTCTT
ATCTATGAAATACATTTTATCTTTTCAAGGTAGTAAAAATTATCATTTGT
GGAAAATTCATAATTCTGCTTTTAATTTTGAGCTGGCAGTTCACTTCAGG
TTAATTTTTATATGGTCACTTTGTAATTTAAATGTCAGATAAATCTTGAT
ATTATGACTATCTTTGTTCTTTGAATTCCCTTGACATAGGCTGAAAATTA
ATTTAAAGCCAATGGACAAATATGTTCTGGATTCTAATCTGCTCCATGGC
ATTTGTGATGTTCTCTCAATGTTGCTGTACTGTCTTGATGACTATAGATT
TAATCTGAGGCTAGAAATTGCATGCTATGAGCAGTCAGCTCTCTACTTCA
TTTTAAAAGTATTTTTGGGCTCTTTAAGCAATTTATATTTTCATAAAGTT
TTGAAATTGATTTATTAATTTCTTCAAAAATATCTGTGGNAATTTTGATA
GTTATTGCTTTGAACCTATAAGTCAATATGTAATAATGTGCCTTAAAATT
ATAGATTTTTTTCTCAGACTGGAACAAGATATATTTTATTATAGCG

Query= MSMg01no388_b08.g1 MSMg01no388_b08.g1 CHROMAT_FILE:
MSMg01no388_b08.g1 PHD_FILE: MSMg01no388_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:20 2005
         (603 letters)



>mm_chr6_26565151_26566149
          Length = 999

 Score = 1102 bits (570), Expect = 0.0
 Identities = 593/603 (98%), Gaps = 4/603 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttttgataaatatatgtattgagtctattttgccattagataaattgaattttcttgttt 60
           ||||||||||||||||||||||||||||||||| ||    |||||||||| |||||||||
Sbjct: 201 ttttgataaatatatgtattgagtctattttgctat----taaattgaatgttcttgttt 256

                                                                       
Query: 61  ttaaaactatttactgaaaacatatttaataaatttcatcacattttaaaatcatgatta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ttaaaactatttactgaaaacatatttaataaatttcatcacattttaaaatcatgatta 316

                                                                       
Query: 121 atatttatgtcttatctatgaaatacattttatcttttcaaggtagtaaaaattatcatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atatttatgtcttatctatgaaatacattttatcttttcaaggtagtaaaaattatcatt 376

                                                                       
Query: 181 tgtggaaaattcataattctgcttttaattttgagctggcagttcacttcaggttaattt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tgtggaaaattcataattctgcttttaattttgagctggcagttcacttcaggttaattt 436

                                                                       
Query: 241 ttatatggtcactttgtaatttaaatgtcagataaatcttgatattatgactatctttgt 300
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttaaatggtcactttgtaatttaaatgtcagataaatcttgatattatgactatctttgt 496

                                                                       
Query: 301 tctttgaattcccttgacataggctgaaaattaatttaaagccaatggacaaatatgttc 360
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tctttgaattcccttgagataggctgaaaattaatttaaagccaatggacaaatatgttc 556

                                                                       
Query: 361 tggattctaatctgctccatggcatttgtgatgttctctcaatgttgctgtactgtcttg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tggattctaatctgctccatggcatttgtgatgttctctcaatgttgctgtactgtcttg 616

                                                                       
Query: 421 atgactatagatttaatctgaggctagaaattgcatgctatgagcagtcagctctctact 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 atgactatagatttaatctgaggctagaaattgcatgctatgagcagtcagctctctact 676

                                                                       
Query: 481 tcattttaaaagtatttttgggctctttaagcaatttatattttcataaagttttgaaat 540
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 677 tcattttaaaagtatttttgggctctttaagcaatttacattttcataaagttttgaaat 736

                                                                       
Query: 541 tgatttattaatttcttcaaaaatatctgtggnaattttgatagttattgctttgaacct 600
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 737 tgatttattaatttcttcaaaaatatctgtggtaattttgatagttattgctttgaacct 796

              
Query: 601 ata 603
           |||
Sbjct: 797 ata 799


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 999
Length adjustment: 10
Effective length of query: 593
Effective length of database: 989
Effective search space:   586477
Effective search space used:   586477
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)