XXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGGAATTCTCTG
CTCTTACTGGGATATATGTATGAATTGTCATCTCCTCTCAACACTCAGTG
ATCAGTGCAGAAGAGAGAATAGACAGATTGTAAGACAAAAAGGACAACGG
TATCTGCTTATCTACTTATCTACACTGCTTATTGAACAAACAGCAGTTTC
ACACATAAGCTCACAGTGGATTGAACTACCTGTAAAAAGACTTCCGATAG
ACCAAGGCAGTCAAAATCTGAGCAAGTATGGAGAAGTTCCTGAGCTCATA
TCACTACTGGAAGAATTATTTAAGTGATGGCTCCTTAGGGGAAATAATAG
TTTACTTCAGGAATGAAGCCCTGAATAGTTACCCATGTTCTAATAAATGG
CTCTGCATCTATGACAGGCAGTACTAAATGGATGAGTTGTTCAGGGTGTG
GTGGGGGGAGAGAGGGAAGGAGGNAGAGAAANANANANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTNNNNNNNNNNNATNTNNNTTNNTNNTNNTTTTNNTTTTTTTTC
TN

CCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCATACTTTTGTGTGGAATAGCAACC
ACTTCCCGGATCCTGCCTCTACTTTCTGCACTAATTTCCCTCAATGAAGG
ATTGTGACCAGAAAGTATAAGCCAAATAATCCCTTCCCTCCTCCAGCCAT
TTTGTACGTTGTTTTTTTTCACAATGAAAATGCAAAGAAAAAAATAGAAT
AATGCATCTCTCCAAACATTTTTTCTTACTCTGAAACTGCTTTTGTTGTT
TTATTTCATGTTATGTATTATACTACATCAGACTCCCAGTCACTGAAATT
TCTTTTAAAATACATAAACATAAGAGTCTTCTGCTGATACGGAACTTAGA
GCATCCTTAAACAAAACAAAACAAAAACATGTATTTCTATGGGTATTATT
TCAATTGTCCCTTTTATTTTTATCACAGCATTGTTTTACATATTTATAAT
TAATTTTAGTATTTCTTTTCCCATGCCTCTTCCTGAACCCCCTTCCAAGG
CCTTTGTTTCATAATTTTACTCCCACATTCATGTCTCCTTTTGTGTACGA
TCCACTGAGTTTAATTAAGATTTCTTGCCTGAGTGGGTGGTAGGTGAGTT
ACTGAAGCATGAACAGCTAAGCTGTGTCTACCCCACTGGTGTACGCAGTA
CCCTTTCCACAACAACTGTTACTTGCCAATAGTTACTTTAAAAAATAGAG

Query= MSMg01no388_d19.g1 MSMg01no388_d19.g1 CHROMAT_FILE:
MSMg01no388_d19.g1 PHD_FILE: MSMg01no388_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:32 2005
         (601 letters)



>mm_chr6_80286172_80287173
          Length = 1002

 Score = 1100 bits (569), Expect = 0.0
 Identities = 593/601 (98%), Gaps = 1/601 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   atacttttgtgtggaatagcaaccacttcccggatcctgcctctactttctgcactaatt 61
           ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 202 atacttttgtgtggaatagcaaccagttcctggatcctgcctctactttctgcactaatt 261

                                                                       
Query: 62  tccctcaatgaaggattgtgaccagaaagtataagccaaataatcccttccctcctccag 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 262 tccctcaatgaaggattgtgaccagaaagtataagccaaataatcccttccctcccccag 321

                                                                       
Query: 122 ccattttgtacgttgttttttttcacaatgaaaatgcaaagaaaaaaa-tagaataatgc 180
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 322 ccattttgtacgttgttttttttcacaatgaaaatgcaaagaaaaaaaatagaataatgc 381

                                                                       
Query: 181 atctctccaaacattttttcttactctgaaactgcttttgttgttttatttcatgttatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 atctctccaaacattttttcttactctgaaactgcttttgttgttttatttcatgttatg 441

                                                                       
Query: 241 tattatactacatcagactcccagtcactgaaatttcttttaaaatacataaacataaga 300
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tattatattacatcagactcccagtcactgaaatttcttttaaaatacataaacataaga 501

                                                                       
Query: 301 gtcttctgctgatacggaacttagagcatccttaaacaaaacaaaacaaaaacatgtatt 360
           ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gtcttctactgatacagaacttagagcatccttaaacaaaacaaaacaaaaacatgtatt 561

                                                                       
Query: 361 tctatgggtattatttcaattgtcccttttatttttatcacagcattgttttacatattt 420
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 562 tctatgggtattatttcaattgtcccttttatttttatcactgcattgttttacatattt 621

                                                                       
Query: 421 ataattaattttagtatttcttttcccatgcctcttcctgaacccccttccaaggccttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ataattaattttagtatttcttttcccatgcctcttcctgaacccccttccaaggccttt 681

                                                                       
Query: 481 gtttcataattttactcccacattcatgtctccttttgtgtacgatccactgagtttaat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gtttcataattttactcccacattcatgtctccttttgtgtacgatccactgagtttaat 741

                                                                       
Query: 541 taagatttcttgcctgagtgggtggtaggtgagttactgaagcatgaacagctaagctgt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 taagatttcttgcctgagtgggtggtaggtgagttactgaagcatgaacagctaagctgt 801

            
Query: 601 g 601
           |
Sbjct: 802 g 802


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1002
Length adjustment: 10
Effective length of query: 591
Effective length of database: 992
Effective search space:   586272
Effective search space used:   586272
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)