Query= MSMg01no388_m12.b1 MSMg01no388_m12.b1 CHROMAT_FILE:
MSMg01no388_m12.b1 PHD_FILE: MSMg01no388_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:11 2005
(453 letters)
>mm_chr6_4769747_4770598
Length = 852
Score = 845 bits (437), Expect = 0.0
Identities = 449/453 (99%), Gaps = 1/453 (0%)
Strand = Plus / Plus
Query: 1 catgattgcctgcatgcgaccgtgctgcccaccatgctgataatgagctaaacctctgaa 60
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 201 catgattgcctgcatgcgaccgtgctgcccgcaatgctgataatgagctaaacctctgaa 260
Query: 61 ctgtaagccagccccagttaaatgattttctttataagagctgctacggtcacggtgtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtaagccagccccagttaaatgattttctttataagagctgctacggtcacggtgtct 320
Query: 121 cttcacagcaatgaaaccccaagacaagctccattgtctaacttcaatgctgcccatctt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 cttcacagcaatgaaaccccaagacaagctccattgtctaacttcaatgctgcc-atctt 379
Query: 181 tgtcatctcacagaaactgtttttgtatctgtagcatgagcatgttattcttcctgtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtcatctcacagaaactgtttttgtatctgtagcatgagcatgttattcttcctgtttt 439
Query: 241 catggttttggtattgcccttcaaattttttatctctgaatagaaagaaagtcagacaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 catggttttggtattgcccttcaaattttttatctctgaatagaaagaaagtcagacaat 499
Query: 301 ctaaggcattagtatgaggaatagctaaattcactgttgcacacaacagcaagatatatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctaaggcattagtatgaggaatagctaaattcactgttgcacacaacagcaagatatatg 559
Query: 361 cttctatacaaaggattgagggtatgaagagagggactcctcatcaaccagcaaatagaa 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 560 cttctatacaaaggattgagggtctgaagagagggactcctcatcaaccagcaaatagaa 619
Query: 421 acactctagaattagttcagaactggagagtgt 453
|||||||||||||||||||||||||||||||||
Sbjct: 620 acactctagaattagttcagaactggagagtgt 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 852
Length adjustment: 10
Effective length of query: 443
Effective length of database: 842
Effective search space: 373006
Effective search space used: 373006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_m12.g1 MSMg01no388_m12.g1 CHROMAT_FILE:
MSMg01no388_m12.g1 PHD_FILE: MSMg01no388_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:11 2005
(549 letters)
>mm_chr6_4930138_4931087
Length = 950
Score = 814 bits (421), Expect = 0.0
Identities = 446/455 (98%), Gaps = 3/455 (0%)
Strand = Plus / Minus
Query: 95 ggcttgcttctttttgttgttgagaattggaccacagaatagatagaacactgctatcca 154
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 950 ggcttacttctttttgttgttgagaattggaccaccgaatagatagaacactgctatcca 891
Query: 155 ctcccttcatgatgacacttgggttgtttccagttttgactactataaataaaagatgtg 214
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 890 ctcccttcatgatgacacttgggttgtttccagttttgactactacaaataaaagatgtg 831
Query: 215 tgtgaatatcacatctgtgtgggtacactcttgtccctcttatgtccacaaccaggaatg 274
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 tgtgaatatcacatctatgtgggtacactcttgtccctcttatgtccacaaccaggaatg 771
Query: 275 ga--atgccttggaggccaggtgattaactttttaagcaattgtcatattaaatattaaa 332
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 gaatatgccttggaggccaggtgattaactttttaagcaattgtcatattaaatattaaa 711
Query: 333 tgatgctcatattgacattcaccccaactctgtgtcactgctcctgtgactccatctgca 392
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 710 tgatgctcatattgacattcaccccaactctgtgtcactgctcctatgactccatctgca 651
Query: 393 cgcccttctaatggtgcatctaatgatagggacactgtaactttaccactaatttctctg 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 cgcccttctaatggtgcatctaatgatagggacactgtaactttaccactaatttctctg 591
Query: 453 atgccagattatgctcataaaccttttatatgccatggtcctttattaaatatgatttta 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 atgccagattatgctcataaaccttttatatgccatggtcctttattaaatatgatttta 531
Query: 513 taatgcccataactgttcccacttc-cacttccca 546
||||||||||||||||| ||||||| |||||||||
Sbjct: 530 taatgcccataactgtttccacttctcacttccca 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 950
Length adjustment: 10
Effective length of query: 539
Effective length of database: 940
Effective search space: 506660
Effective search space used: 506660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
