Query= MSMg01no390_b14.b1 MSMg01no390_b14.b1 CHROMAT_FILE:
MSMg01no390_b14.b1 PHD_FILE: MSMg01no390_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:54 2005
(436 letters)
>mm_chr6_131366882_131367717
Length = 836
Score = 774 bits (400), Expect = 0.0
Identities = 429/442 (97%), Gaps = 7/442 (1%)
Strand = Plus / Minus
Query: 1 aacagaaatgaaaatagaacacagaccctcatgatccaaccatattacacat------aa 54
|||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 824 aacagaaatgaaaataaaacacagaccctcatgatccaaccatattacacataaccagaa 765
Query: 55 ccagaagtgacagctcctgcttctagtcccagaacgccaaagactaagacagaaggatat 114
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 764 ccagaagtgacagctcctgcttctagtcccagaactccaaagactaagacagaaggatat 705
Query: 115 caatgagttcaagatcagcctgcactgcagagtgaaacccgatccccctccaaaaagtaa 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 caatgagttcaagatcagcctgcactgcagagtgaaacccgatccccctccaaaaagtaa 645
Query: 175 aacttctgtaaatgtgaaatgttctaaagtcaaagcttttgtgagtatcaacctgacacc 234
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 aacacctg-aaatgtgaaatgttctaaagtcaaagcttttgtgagtatcaacctgacacc 586
Query: 235 acgagtggaatattccatgcctgacctcatgggatgagtcacactcaaaacatagatgca 294
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 atgagtggaatattccatgcctgacctcatgggatgagtcacactcaaaacatagatgca 526
Query: 295 ataaaaatataatgtataattatctccaggcaatgtgtgtaatgtatgtgtgaaacagaa 354
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 525 ataaaaatataatgtataattacctccaggcaatgtgtgtaatgtatgtgtgaaacagaa 466
Query: 355 atgaatttcatgtttagacttggatctcttccctactgggcctctttttatatacatgta 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 atgaatttcatgtttagacttggatctcttccctactgggcctctttttatatacatgta 406
Query: 415 aatttacataagaagtttactt 436
||||||||||||||||||||||
Sbjct: 405 aatttacataagaagtttactt 384
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_b14.g1 MSMg01no390_b14.g1 CHROMAT_FILE:
MSMg01no390_b14.g1 PHD_FILE: MSMg01no390_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:54 2005
(557 letters)
>mm_chr6_131170068_131171024
Length = 957
Score = 1046 bits (541), Expect = 0.0
Identities = 553/557 (99%)
Strand = Plus / Plus
Query: 1 cttgctgctgaatcactgtaaaacaaataaaaataatggacagtgatttacatttgaaac 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttgctgctgaaacactgtaaaacaaataaaaataatggacagtgatttacatttgaaac 260
Query: 61 ttacactgatttaaaccattattttttcaagttaaagtttattgactaaaatatgaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacactgatttaaaccattattttttcaagttaaagtttattgactaaaatatgaagaa 320
Query: 121 tatgaaaaattactaagtgtatcactagaagtttctcattttctctaaactcataaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgaaaaattactaagtgtatcactagaagtttctcattttctctaaactcataaaaat 380
Query: 181 tgccttggaccaatgacatggctcaatgggtatcagccattcacaacaaatctgacaatc 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 tgccttggaccaatgacatggctcaatgggtataagccattcacaacaaatctgacaatc 440
Query: 241 tgagatcagactgcagatactaaagagtagaatgagagaagtgactctttcaagttcact 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagatcagaccgcagatactaaagagtagaatgagagaagtgactctttcaagttcact 500
Query: 301 cttgtacacatgtgctgtgacatgtgcccatacatgtgtataccttcacacaaaaataaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttgtacacatgtgctgtgacatgtgcccatacatgtgtataccttcacacaaaaataaa 560
Query: 361 taaatctaataaagatagaaattgatcacaaatcaacttcttatctattgcacattgttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaatctaataaagatagaaattgatcacaaatcaacttcttatctattgcacattgttg 620
Query: 421 atttttagtcctcaagtaatatacagtttcagaatcactaagagatgactttaaattatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atttttagtcctcaagtaatatacagtttcagaatcactaagagatgactttaaattatg 680
Query: 481 cttccctatgaaaatttttgcagcaatgacaaataaaaagaagaaataaatatgtggcac 540
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 681 cttccctatgaaaatttttgcagcaatgaaaaataaaaagaagaaataaatatgtggcac 740
Query: 541 acagggatcttctgtga 557
|||||||||||||||||
Sbjct: 741 acagggatcttctgtga 757
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
